EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-04029

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:160912650-160913300

Target genes

Number: 15
Name	Ensembl ID

RP11	ENSG00000233691
F11R	ENSG00000158769
USF1	ENSG00000158773
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
ACA64	ENSG00000238934
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
TOMM40L	ENSG00000158882
SDHC	ENSG00000143252
C1orf192	ENSG00000188931

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:160913230-160913242	GTTTGTTTGTTT	+	6.32
ONECUT2	MA0756.1	chr1:160912985-160912999	ATTATCGATTGTTT	-	6.16

Enhancer Sequence

GACTCCATCT CAAAAAAAAA AAAAAAAAGT TCTTTATTGC CTTCAGCTGT CAGGGCTTCA 60
TGACTTCCAT TCTATAGAAT TTAAACAAAA TCCTCTGTTT CTCAATGGCA GCACAGCTGG 120
CATTTGAGAT CAGACCATTC TTTGTCATGG AGCAGGGATG TCCTGTGCAG TGTAAGGTGT 180
TTCACAGCAT CTCCAGCCTC TATTCACTAG ATGTCAGTAG CGCTCCTGCC AGGCCTTCCA 240
CCACCACTCA TTGCGGTGTC TCCAGACATT GCCAAATGTT CCCTAGATGT AGGGTTGCCA 300
GGTAAAATAT TGCATGGGAC AAACATACTA AAAATATTAT CGATTGTTTA TCTGAAATGC 360
AAATTTAAGT TGGCCTTCCA TATCTTTATT TGCTAAATCT GGCAACCCTA TCTGAGAGGT 420
GAAAAACCCT ATCTGAGAGG TAAAATCACC ACTACATCTC CTACCTCCCA TCCCATTTGA 480
AAACCAATGC TCTAGTCCAC AGGGAGCAAT GGAGAAAAAG TGTGGTAATG GGTTTGGGAA 540
ATGTTATGAT TAGATTTGCA TTTGGAGCAA AGCACTTTTT GTTTGTTTGT TTTGTGTTGT 600
GTTGTTTTGT TTGAGACGCA GTCTCACTCT GTTGCCCAGG CTGGAGTGCA 650