EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS088-03892 
Organism
Homo sapiens 
Tissue/cell
HeLa-S3 
Coordinate
chr1:156449590-156450620 
Target genes
Number: 44             
NameEnsembl ID
RIT1ENSG00000143622
SNORA42ENSG00000207475
SCARNA4ENSG00000252808
KIAA0907ENSG00000132680
ARHGEF2ENSG00000116584
SSR2ENSG00000163479
UBQLN4ENSG00000160803
LAMTOR2ENSG00000116586
AL355388.1ENSG00000222611
MEX3AENSG00000254726
LMNAENSG00000160789
SEMA4AENSG00000196189
SLC25A44ENSG00000160785
BGLAPENSG00000242252
PAQR6ENSG00000160781
SMG5ENSG00000198952
C1orf85ENSG00000198715
C1orf182ENSG00000163467
CCT3ENSG00000163468
C1orf61ENSG00000125462
RP11ENSG00000236947
YENSG00000206651
MEF2DENSG00000116604
IQGAP3ENSG00000183856
TTC24ENSG00000187862
APOA1BPENSG00000163382
GPATCH4ENSG00000160818
HAPLN2ENSG00000132702
BCANENSG00000132692
NESENSG00000132688
CRABP2ENSG00000143320
RRNAD1ENSG00000143303
ISG20L2ENSG00000143319
MRPL24ENSG00000143314
PRCCENSG00000143294
HDGFENSG00000143321
NTRK1ENSG00000198400
SH2D2AENSG00000027869
INSRRENSG00000027644
PEAR1ENSG00000187800
LRRC71ENSG00000160838
MIR765ENSG00000211581
ARHGEF11ENSG00000132694
ETV3ENSG00000117036
TF binding sites/motifs
Number: 1             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ZBTB18MA0698.1chr1:156450144-156450157AAACATCTGGACA-6.07
Number of super-enhancer constituents: 33             
IDCoordinateTissue/cell
SE_01624chr1:156448568-156451322Aorta
SE_03183chr1:156449563-156452436Brain_Angular_Gyrus
SE_04925chr1:156442957-156476137Brain_Cingulate_Gyrus
SE_05851chr1:156442823-156476598Brain_Hippocampus_Middle
SE_06826chr1:156443700-156452552Brain_Hippocampus_Middle_150
SE_07824chr1:156444206-156476920Brain_Inferior_Temporal_Lobe
SE_09328chr1:156448622-156455242CD14
SE_10496chr1:156450434-156452114CD19_Primary
SE_11165chr1:156449814-156479014CD20
SE_17525chr1:156449927-156453551CD4p_CD25-_CD45RAp_Naive
SE_18052chr1:156449756-156452245CD4p_CD25-_CD45ROp_Memory
SE_18886chr1:156449989-156454873CD4p_CD25-_Il17-_PMAstim_Th
SE_19364chr1:156450150-156452263CD4p_CD25-_Il17p_PMAstim_Th17
SE_20186chr1:156449941-156452056CD56
SE_22473chr1:156449619-156452205CD8_primiary
SE_26648chr1:156449368-156451281Esophagus
SE_31445chr1:156448641-156449983Gastric
SE_31445chr1:156450023-156451185Gastric
SE_37054chr1:156444182-156450085HSMMtube
SE_40614chr1:156444648-156455540Left_Ventricle
SE_42136chr1:156444233-156451952Lung
SE_48054chr1:156442802-156481304Psoas_Muscle
SE_48580chr1:156448545-156451252Right_Atrium
SE_50090chr1:156449419-156452902Sigmoid_Colon
SE_51078chr1:156440989-156452153Skeletal_Muscle
SE_53429chr1:156449690-156451282Spleen
SE_54540chr1:156443093-156451511Stomach_Smooth_Muscle
SE_58979chr1:156449810-156478804Ly3
SE_60601chr1:156449917-156475935DHL6
SE_61299chr1:156450124-156478621HBL1
SE_61431chr1:156449469-156496609Toledo
SE_62421chr1:156450235-156479388Tonsil
SE_65297chr1:156447920-156451354Pancreatic_islets
Number: 1             
IDChromosomeStartEnd
GH01I156474chr1156444370156452097
Enhancer Sequence
AGACAGAAAG ATGGAGGGGC AGGATCAGGC CAGGTTGACC CCTTCCATGG AGTCCACTTT 60
TCCTGGGAGG GCAGGCAAGG GTTCTTCTCA TTTCTGGGCT ACGCATCCTA GGGCCAGCAG 120
TTCAAGCTCC CTGCCCTGTG CCCTTGTGGA GTCCTGCCTG CCAGTCCCAC CAAGGAAGAA 180
CTTTGGGGAG AAACTCTGGG TCCATACTCT GGGTCCATTT CTGGCCCACA GAATGAGAAC 240
AAGGCTCTGC TCACTGCAGA CAGGACCAGG GACACCCCCT AGTGGAGGTG GGTTAGTCCT 300
CAGCCAGGCA GGACACACGG GGAGCAGGTT AGAGGCCCTG ATAACAGACT CAAATTCACA 360
CACGGCTGTT AAAGGCTTGC ACCACGGGTA GGGACATCAT TTCACTTGCA GTCTCCACCC 420
ATCTGGCCTG CTGCAGAGAG AGCTCACCCC CACCTCGCTG CCTTCCCCTT CAGCAGTTCT 480
GCTTTCCCTA CACAAGGCTG AGTGTCTCTG GTTGGGCTAT CAGAGCAAGC CCAAGCAGGC 540
CTCTCCCCCC AAAAAAACAT CTGGACAAAG AGCACACTCC ACTTTGCTGT CCTCTAAGGA 600
TCTCATGTCA TCTACACACT TCTTGCTGGA GAGGGGGACA CTCCAGGCCT CTCCAACTTA 660
TGCTCCATCC CAGTAGAGTC TCAGCAGGGA TGCGGGTTTA TCATGACCAA GGTCAGAGGT 720
TCCTCAGTGG TCACTAAGAA CCCGAGCATG GCTCAGAGCG GAGCACCCAT CAGGGCAGCC 780
GAGAGCCAGG GCGCGAAGCC ACACCATGCA CCACAGGGAG GCTCTGCTCC ATGCGACTAC 840
TCACGGCCAG TCTATAACTC TGCATCATTT TATCAAACTC CTCGTCTATC TTTTTATATT 900
TCTCTTCCGT CTGGGGGGTC AGGGCAAACA CCTCGTCCAC CTCAGGGCTC TCACATTCCC 960
TGTGCTTCTT GTGCAGCGCC TGGGGGGAAG GGGCCGGAAG GGGGGGCCAA CAGAGACAGA 1020
GTGAGTGGGG 1030