EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS088-03834 
Organism
Homo sapiens 
Tissue/cell
HeLa-S3 
Coordinate
chr1:155932980-155934770 
Target genes
Number: 46             
NameEnsembl ID
DAP3ENSG00000132676
YY1AP1ENSG00000163374
RP11ENSG00000234937
U4ENSG00000201614
RIT1ENSG00000143622
SNORA42ENSG00000207475
SCARNA4ENSG00000252808
KIAA0907ENSG00000132680
RXFP4ENSG00000173080
ARHGEF2ENSG00000116584
SSR2ENSG00000163479
UBQLN4ENSG00000160803
LAMTOR2ENSG00000116586
AL355388.1ENSG00000222611
MEX3AENSG00000254726
LMNAENSG00000160789
SEMA4AENSG00000196189
SLC25A44ENSG00000160785
PMF1ENSG00000160783
BGLAPENSG00000242252
PAQR6ENSG00000160781
SMG5ENSG00000198952
TMEM79ENSG00000163472
C1orf85ENSG00000198715
VHLLENSG00000189030
AL589685.1ENSG00000228155
C1orf182ENSG00000163467
CCT3ENSG00000163468
RHBGENSG00000132677
YENSG00000206651
MEF2DENSG00000116604
IQGAP3ENSG00000183856
APOA1BPENSG00000163382
GPATCH4ENSG00000160818
HAPLN2ENSG00000132702
BCANENSG00000132692
NESENSG00000132688
CRABP2ENSG00000143320
RRNAD1ENSG00000143303
ISG20L2ENSG00000143319
MRPL24ENSG00000143314
PRCCENSG00000143294
HDGFENSG00000143321
SH2D2AENSG00000027869
PEAR1ENSG00000187800
MIR765ENSG00000211581
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr1:155934691-155934712AAAAAAAAAGAAAAAGAAAAA-6.09
ZfxMA0146.2chr1:155933695-155933709GAGGCCGAGGCGGG-6.01
Number of super-enhancer constituents: 28             
IDCoordinateTissue/cell
SE_00371chr1:155930284-155933365Adipose_Nuclei
SE_01845chr1:155931238-155933194Aorta
SE_02626chr1:155931217-155933159Astrocytes
SE_03231chr1:155931279-155933168Brain_Angular_Gyrus
SE_03962chr1:155931212-155933183Brain_Anterior_Caudate
SE_03962chr1:155934540-155952025Brain_Anterior_Caudate
SE_04939chr1:155929250-155933328Brain_Cingulate_Gyrus
SE_04939chr1:155933998-155950544Brain_Cingulate_Gyrus
SE_05884chr1:155929293-155933471Brain_Hippocampus_Middle
SE_05884chr1:155934346-155954766Brain_Hippocampus_Middle
SE_06771chr1:155929354-155933357Brain_Hippocampus_Middle_150
SE_07892chr1:155929156-155933508Brain_Inferior_Temporal_Lobe
SE_07892chr1:155934208-155950911Brain_Inferior_Temporal_Lobe
SE_09348chr1:155929538-155933341CD14
SE_09348chr1:155934545-155952363CD14
SE_11511chr1:155934212-155955089CD20
SE_13504chr1:155932021-155933320CD34_Primary_RO01536
SE_27178chr1:155931316-155933203Esophagus
SE_34744chr1:155929320-155933460HeLa
SE_36575chr1:155929457-155933178HMEC
SE_37367chr1:155929322-155933279HSMMtube
SE_40938chr1:155931234-155933205Left_Ventricle
SE_42293chr1:155931224-155933226Lung
SE_53512chr1:155931234-155933166Spleen
SE_58809chr1:155914126-155961123Ly1
SE_59715chr1:155907656-155970179Ly4
SE_61625chr1:155913651-155954372Toledo
SE_62496chr1:155912775-155960919Tonsil
Number: 2             
IDChromosomeStartEnd
GH01I155958chr1155928711155933129
GH01I155964chr1155934640155935270
Enhancer Sequence
GGGACATTGG GACATTTGGC CTCTACCCTG GCTTGGCTAA AACTCGTGGG GCCCTAGGAT 60
AAGGACCTCA CAGTTCACGT GAGGTTTTCA AGGTCCATTC CAGGTTAATA TTCTGCATTA 120
TTATGATCTT AGATACTTTT CTAATCATTT TTATCTTTTT TTTTTTTTTT TTTTGAGACA 180
GAGTCTCACT GTATTGCCCA GGCTGGAGTG CAATGGCGCG ATCTCAGCTC ACTGCAACCT 240
CCACCTCCTA GGTTCGAGCA GTTGTCCTGC CTCAGCCTCC TGAGTAGCTG GGATTACAGG 300
CACGCACCAC CAGGCCCGGC TAATTTTTGT ATTTTTAGTA GAGATGGGGT TTCTTCATAT 360
TGGTCAGGCT GGTCTCGAAA TCCTGACCTC GTGATCTCCC CACCTCGGCC TCCCAAAGTG 420
CTGGGATTAC AGGCATGAGC CACCACACCC GGCCCTCATT TTTATCTTTC AAAAATTTTA 480
TTATTATTTT TTTTTTTCCA GAAATGAGGT CTTACTCTGG TGCCCAGGCT GGAGTGTAGT 540
GGCACAATGA TAACTCACTG CAGCCTCGAA CTTCTGGGCT CAAGCGATCC TCCTGTCTCA 600
GCCTCCCAAG TAGCTGGGAC TATAGGCACA TGCCACCACA CCTGACTAGT TTTTTAAAAT 660
ATTTTTTAAA GACGGCTGGG CACGGTGGCT CACGCCTATA ATCCCAGCAC TTTGGGAGGC 720
CGAGGCGGGT GCATCACCTG AGGTCAGGTG TTCGAGACCA GCTTGGCCAA CATGATGAAA 780
CCCTGTCTCT ACTAAAAATG CAAAAATTAG CCGGGTGTAG TTGTAGGCGC CTGTAATCCC 840
AGCTACTTGG GAGGCTGAGG CAGGAGAATT GCTTGAACCT GGGAGGCGGA GGTTGCAGTG 900
AGCCGAGATA GCGCCAGTGC ACTCCAGCAT GGGCGACAGA GCAAGACTCT GCTTCAAAAA 960
AAAAAAAAAA AAAAAAAAAT ATATATATAT ATATATATAT ATATATATAC ATATATATAT 1020
ATATATATTT TTTTTTTAGA GACAGAGGTC TTGCTTTGTT GCCTAGGTTG GTCTCAAAAT 1080
CCTGGCGTCA AGTGATCCTC CCACCTCGGC CTCCCAAATC GCTGAGATTA TAGGCATGAG 1140
CCACCACGCC CAGTTCCATT TTTTATCTTT ACACCTTATC ATCTCAAGCT GTGAGCTATT 1200
TTAGGGTAAG AACCATATGT CTTCTACATG TCGAGGCTTC CCACAGTCTC CAGCACGGTG 1260
TTAAGCGTGG AACAAGCACA GAGTAAAGAC TGAAGACAGA GATAAAGAAG GGATAAAGAG 1320
AGGGTGTTGG AGACCAACAG CATCAAGAGG TAGGGACCTA GTGGGCAACC TGTGGGATAC 1380
CAGGCAGGGT CTTGTAGGCC AAGAGGGAAA GGGTTTTGAG AGGTAGGGGC TGGTAGAAAG 1440
AAGGACACAG CCGGGTACGG TGGCTCACGC CTGTAATCCC AGCACTTTGG GAGGCTGAGG 1500
CGGGCAGATC ACCTGAGGTC AGGAGTTTGA AACCAGCCTG GCTAACATGG TGAAACCCCG 1560
TCTCTACTAA AAATGCAAAA CTTAGCCAGC ATGGTGGCAG GCGCCTGTAA TGAGAATCGC 1620
TTGAACCTGG GAGGTGGAGG CTGCAGTGAG CCGAGATCAT GCCACTGCAC TTCAGCCTGG 1680
TTGAGAGAGT GAGACTCCAT CTCAAAAAAA AAAAAAAAAA GAAAAAGAAA AATAAAGAAG 1740
GAAGTAGATA AACAGGACCT GGTGAAGGAA GAGGAAGACT AGGGTGGTCT 1790