EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS088-03758 
Organism
Homo sapiens 
Tissue/cell
HeLa-S3 
Coordinate
chr1:154982870-154983390 
Target genes
Number: 42             
NameEnsembl ID
UBE2Q1ENSG00000160714
ADARENSG00000160710
PMVKENSG00000163344
PBXIP1ENSG00000163346
PYGO2ENSG00000163348
SHC1ENSG00000160691
CKS1BENSG00000173207
FLAD1ENSG00000160688
LENEPENSG00000163352
ZBTB7BENSG00000160685
DCST2ENSG00000163354
DCST1ENSG00000163357
RP11ENSG00000232093
ADAM15ENSG00000143537
EFNA4ENSG00000243364
EFNA3ENSG00000143590
EFNA1ENSG00000169242
SLC50A1ENSG00000169241
DPM3ENSG00000179085
HMGN2P18ENSG00000223452
TRIM46ENSG00000163462
KRTCAP2ENSG00000163463
MUC1ENSG00000185499
MTX1ENSG00000173171
THBS3ENSG00000169231
GBAP1ENSG00000160766
MTX1P1ENSG00000236675
AL713999.1ENSG00000216109
GBAENSG00000177628
FAM189BENSG00000160767
SCAMP3ENSG00000116521
HCN3ENSG00000143630
CLK2ENSG00000176444
PKLRENSG00000143627
FDPSENSG00000160752
RUSC1ENSG00000160753
ASH1LENSG00000227773
snoU13ENSG00000238805
POU5F1P4ENSG00000237872
MSTO1ENSG00000125459
DAP3ENSG00000132676
YY1AP1ENSG00000163374
Number of super-enhancer constituents: 39             
IDCoordinateTissue/cell
SE_00535chr1:154968005-154987480Adipose_Nuclei
SE_01029chr1:154971412-154987437Adrenal_Gland
SE_03046chr1:154983312-154983905Bladder
SE_04371chr1:154975125-154986197Brain_Anterior_Caudate
SE_05420chr1:154975117-154986988Brain_Cingulate_Gyrus
SE_06112chr1:154975116-154991667Brain_Hippocampus_Middle
SE_07136chr1:154971348-154985701Brain_Hippocampus_Middle_150
SE_08574chr1:154982139-154986021Brain_Inferior_Temporal_Lobe
SE_12314chr1:154979992-154986177CD3
SE_14762chr1:154971157-154987264CD4_Memory_Primary_7pool
SE_17044chr1:154979797-154987116CD4p_CD225int_CD127p_Tmem
SE_17548chr1:154971096-154992943CD4p_CD25-_CD45RAp_Naive
SE_17979chr1:154971185-154991480CD4p_CD25-_CD45ROp_Memory
SE_18930chr1:154975194-154992517CD4p_CD25-_Il17-_PMAstim_Th
SE_19307chr1:154971380-154987240CD4p_CD25-_Il17p_PMAstim_Th17
SE_23265chr1:154975084-154987002Colon_Crypt_1
SE_23923chr1:154975083-154985339Colon_Crypt_2
SE_24954chr1:154982371-154983078Colon_Crypt_3
SE_24954chr1:154983079-154985424Colon_Crypt_3
SE_26282chr1:154975186-154984319Duodenum_Smooth_Muscle
SE_26626chr1:154971404-154992820Esophagus
SE_31489chr1:154971403-154990904Gastric
SE_33691chr1:154982048-154986104H2171
SE_41104chr1:154983315-154986202Left_Ventricle
SE_41600chr1:154972085-154986790LNCaP
SE_42490chr1:154975153-154987405Lung
SE_48331chr1:154983306-154985524Psoas_Muscle
SE_50133chr1:154971335-154992744Sigmoid_Colon
SE_51640chr1:154971503-154982969Skeletal_Muscle
SE_51640chr1:154983045-154986114Skeletal_Muscle
SE_52379chr1:154971308-154992003Small_Intestine
SE_53597chr1:154971362-154987092Spleen
SE_55030chr1:154983136-154985121Stomach_Smooth_Muscle
SE_59127chr1:154971104-154991422Ly3
SE_60203chr1:154969567-154991253Ly4
SE_61653chr1:154971190-154991278Toledo
SE_62469chr1:154971183-154991923Tonsil
SE_65436chr1:154971139-154985261Pancreatic_islets
SE_68767chr1:154980220-154985610H9
Number: 1             
IDChromosomeStartEnd
GH01I155010chr1154982643154986930
Enhancer Sequence
AGTGTGAGTG CTGGGGGTGG TGAGGTTAGG AGGGGGAAGC GTCATATGGG GGATGGGGAA 60
GGCATGCACA AGCTTGGAGG GGCTGGGGTG GGGAGAGAAG GGCTCCATAA ATGTCAGAGC 120
ATCCCTGGGC AGAGAACCTC TTCTTTGAAG CCCTTCTAGT CCTCATGTGA GAAGAGGCTC 180
AGCCCCTTTA CCTTCCCTCC CCAACTGGGC AATCCAGATG GCTGCAGCTC CTGGGCCCCA 240
GAGGCCCTGG GAAGCGGTGG GGGAAGCTGG AGAACAAGGA TTCCTGGGTC CCTTAGGACT 300
TTGGACTGGC TGTCCAATTT CCCCACCCCC CTGGTCCAGA CGCAGGCCAA AGCCATGGCT 360
TCGTGCAAAC TTAGCTCCAA AAAAACAGGA AGAGAACCTG AGGCTGGAGT TGGGGTGGGG 420
GGGTGGAGGG AGAAAGGAGA CAGAAGTAAG GGGGAGGGGT GGCCAGCCAA GGCACCAGGA 480
GCGTTGGGAA GAGCCTCAGG TCTCTCCATC ATCCCTGGCA 520