EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-03268

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:115183450-115185630

Target genes

Number: 10
Name	Ensembl ID

RP4	ENSG00000226984
EIF2S2P5	ENSG00000225650
TRIM33	ENSG00000197323
RP11	ENSG00000236480
BCAS2	ENSG00000116752
DENND2C	ENSG00000175984
NRAS	ENSG00000213281
Y	ENSG00000201900
CSDE1	ENSG00000009307
SIKE1	ENSG00000052723

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:115185144-115185155	TTCTTATCTGT	+	6.14
GATA2	MA0036.3	chr1:115183706-115183717	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:115183706-115183717	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:115185144-115185155	TTCTTATCTGT	+	6.62
Gata4	MA0482.1	chr1:115183705-115183716	AAGAGATAAGA	-	6.02
Gata4	MA0482.1	chr1:115184906-115184917	AAGAGATAAGA	-	6.02
MEF2B	MA0660.1	chr1:115183594-115183606	GCTATTATTAGC	-	6.07
Mecom	MA0029.1	chr1:115184908-115184922	GAGATAAGATAAAG	+	6.36
NKX2-3	MA0672.1	chr1:115184668-115184678	TTCAAGTGGT	-	6.02

Enhancer Sequence

CATAATAAAT AACTGCTGTT AAAGAGTAAA ACACATGCAG ATATTTTAAT AACAAACAGC 60
CTTTGATTTT TTAATTAAAG CTATTTAATA GTTTGAGTGC CTGTGTACTA GTCTCAATTT 120
GTCTCAATTT ATTGCTTACT GATTGCTATT ATTAGCTTGA CAATGCACAG AAATTCTGAA 180
GAGAGAATAT GTTCCTGTTA TGTTTGGCTT CCTTAAAAAA AAATCTTTCT AAAATCTGTT 240
TTTTAGAGAG CAGGAAAGAG ATAAGAAGAT TCTCTGAAGG TAGGAAAGCC ATTCCTAGGT 300
GAACAGAATA AATCACTTTG GCCGGGCATG GTAGCTCATG CCTGTAATCC CAGTACCTGT 360
TGGGAGGTCA AGGTGGGAGA ATTGCTTGAG CCCAAGAGAC CAGCCTGGGC AACATAGCGA 420
GATCCTTTCT CAAAAAAAAA AAAAAAAAGA AAAGAAAAAG AAAAAAAATC GCTTTGAACT 480
CAGCAATTAG AGGCAATACT AACATAATGG CAAAACAAAT ATATAGCTGA TACAGTTTGG 540
ATATTTGTCC CCTCCAAATC TCATGCTGAA ATCTGATCTC CAATGTTGGA AGTGGGGTTG 600
AGTGGGAGGT GTTTGTGTCA CAGGGATGGA TCCCTCATGA ATGGCTAACT GCCCTCCCTA 660
AGGTAACAAG TGAGTTCTTG CTCTATTAGT TAACACAACA GCTGGTTATT TGAAAGATCC 720
TGGCACCTCC TCTCAACTCT CTTGCTCCCT CTCTTGCCAT GTGACACGTC TCCTCCCCCT 780
TCACTTTCCA CCATGATTGT AACCTTCCTG AGGCCTCACC AGAAGAAGAT GCTAGGGTCA 840
TGCTTCTTGT CCAGCCTGAA GAACCATAAG CCAAATAAAC CTCTTTTCTT TATAAATTAC 900
CCAGCCTCAG GTAATCCTTT ATAGCAACGC ACAATGGACA AATACAATAG TCAACAAATA 960
CTTATGAAAC AATTGGGAAA AGCCAACTGC ACAGTTTTAA ACCTATTTTA AAATGTCGTA 1020
GGTACACAAA ACTTGTGTTT TTATGATGCA TACAAAAATA AGATCATAAT TTTGCCACTA 1080
AACTAGTTTC CGGTATATAT CATATATATA CACACATATA TGTATATATA TATATTTTTT 1140
TGAGATGGAG TCTTGCTCTG TCACCTTGGC TGGAGTGAAG TGGCACAATC TCAGCACACT 1200
GCAACCTCTG CCTCCCGGTT CAAGTGGTTC TCCTACCTTA GCCTCCCAAG TAGCTGGGAT 1260
TACAGGCATA TGCCACCACG CCCAGCTAAT TTTTGTATTT TTGGTAGAGA CGGGTTTCAC 1320
CCTGTTGGGC CGGCTGGTCT CAAACTCCTG GTCTCAAGTG ATCCGTCCGC CTCGGCCTCC 1380
CAAAGTGCTA GGATTACAGG TGTGAGCCAC CGCGCCCAGC TAATAAAATT AAGCAGGTAA 1440
ATATTTCATG GTGTGCAAGA GATAAGATAA AGTCTATACT CCTTAATATG ACATATAAGG 1500
TCTTTCACCC TCTAATTCAA GCTCTGACTC TTGCCACTTG CCTTACTCAC CAGCTACATA 1560
TTTTCCAATA ATGCCAAATA ATCTGGAACT ATTAGCAGTC CAAAGTTAGA ATGTTCGAGT 1620
TAGAATTCAA ACACTAACAT AGATTTGGTT CTTGGTTGTA AATCATTAGT CCAATTAACC 1680
CTTCTAAGCT TGTTTTCTTA TCTGTAGAAT GATCACAATG TTTACAGATA ATACTTACTG 1740
AGCACTTAAT ATGAGCCAGG CATAGCTCTA CTAACTTTAA CCATATTAAC TCACCTAATT 1800
CTTGTAACAA CCCCATGAGG TAGATACTAC TGTTAATCTC ATTTTACAGA TAAGGCAATG 1860
AGGCACCAAG AGGTTAAGTA ACAAATACAT GTCTTAGCAT CCTTTGGCAC AACAGATACA 1920
GATATTTATT TTATAAGGTT GTGAGGATTA AATATCAGAT AAAGTAAATA AAATGTTTAA 1980
GACAGTGACT GGAATACAGT AACTGCTCAA TAAATGACAG GTACTATAAA TTTCTCTCTG 2040
AATACACCAT GTACTTTCAA GATCAGTTGA AAGTTTTTCC GTGAAAGCTT CCTTAGCCCT 2100
TTCCCCAGAG TTAATCACTC CTTTTGTGTG CTTCTATTAC ACCTATTTGC ATATTGTTAT 2160
ACTTTTACAA TTCTGAATTT 2180