EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-02704

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:85437480-85438950

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:85437744-85437756	AAACAAACAAAC	-	6.32
IRF1	MA0050.2	chr1:85438192-85438213	GAATAGAAAATGAAAGAAAAG	-	7.24
NR2C2	MA0504.1	chr1:85438534-85438549	TGACCTTTGCCCCAG	-	6
NR2F1	MA0017.2	chr1:85438530-85438543	CTCTTGACCTTTG	-	7.52
Nkx3-2	MA0122.3	chr1:85437890-85437903	AAAACCACTTAAG	+	6.74
Nr2f6	MA0677.1	chr1:85438534-85438548	TGACCTTTGCCCCA	-	6.2

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I084971

chr1

85437305

85439732

Enhancer Sequence

ATGCCCGTAA TCCCAGCACT TTCGGAGGCC AGGGCAGGCA GATCACTTGA GGACAGGAGT 60
TCAAGACCAG CCTGGCCAAC ACGGCGAAAC CCTGTCTTTA CCAAAAATAC AAAATTAGCT 120
GGGCATGGTA GCACAAACCT GTAACCCCAG CTACTCGGGA GGCTGAGGCA CAAGAATCAC 180
TTGGAACCCA GGAGGCAGAG GTTGCAGTGA GCTGAGAATG TGCCACTGGA CTCCAACCTG 240
GGGGACAAAA ACAAACAACA ACAAAAACAA ACAAACAAAA AAATTAAGTC AGCAGACGGC 300
AGAAATACTG CAACTTCCAT CACAAATGAA AATCACCAAC AGTTTAAGAA AAGCATACAG 360
CTGCTAACTT GTGGTAACAT AAGTCAGGAG AATGAAAGTA ACTGTACCGT AAAACCACTT 420
AAGGAACAGA AATCAATGAA GATCTAAATT ACACAGACCC ATCAGCTACA GGGCTGTCAT 480
GCAATTGAAA TTGCATGAAA TAAATAAGAG CAATCACAGC TTTTATGAAT TATTTATGTT 540
TCATTAACCC ATAGGAAATG CATGATCTGG ATTTTTATAA GCTTAATAAT GGCAGCACTA 600
AAGAACAAAA TATCAAAGAA AAAAAGCATA GTATTTGAAG GCATAAAAAT AAGATCTGAA 660
ATAGAATAGA AAGCCACCCA TACAGTGGGT TAAATAAAAG CCAGAGATGC TGGAATAGAA 720
AATGAAAGAA AAGAAGGCTG AGACTGGTAC TGTGGTAAGA AACCAGGAGG AAGGCACAAC 780
AAAGCTACTG TCAGGTATTA AGAAAACCTA CTGTCTCCAC AGATAATCAG GACTATGAGG 840
TTGGCATTAA GAAAACCTAC TCTCTCCACA AATAATCAGG ACTGTGTGAC ATTGGCTAAG 900
TTTAAGGCTA TCATATGATC AAGGGCAATT TCAGCTTTAT CAAAACAATG ACTAAGAGTC 960
TAACGGAAGC CTGAAGTTTT GAAACAAAAC AAGATGTCAG TGATTCTTAA CCTTATTGGG 1020
GTTATAAACC CCTATGAGAA CAGAAAAAGG CTCTTGACCT TTGCCCCAGG AAAATGAATA 1080
CACCAGTTTC AGTGATGGTA TTTTGTCAGC AAATAAGCTA ACCAGCCCAG GATGCTATTG 1140
CCTTTGGCTT ATGTGATCCC CCTACTTGAC AAGGGGCCTG AAAGTTGTTT TTATCCCCTG 1200
CTGCAGTTGT CTCCAAAGTG GGGTCCTTGT GCACAAGGAC GTATGCAAGA CCATTCACTG 1260
GTATGTGAGA AGAAACTATT AGGGCTTCTA ATTGTGTTAA TTTAGAAAAT AGAGAAGTAA 1320
AGAATTCCCA AGATTTAATA TATGAATTGT TACCTATCAC ACCTAAGGTG CCCTCACTCG 1380
GTCAGTAACA TCTGATGGGA CTGACACAGT GGCTCATGTC TGTAATCTCA ACACTTTGGG 1440
AGACTGAGGC AGGAGGATCA CTTGAGGCCA 1470