EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-01852

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:44460310-44460770

Target genes

Number: 14
Name	Ensembl ID

KDM4A	ENSG00000066135
RP11	ENSG00000229444
SHMT1P1	ENSG00000224751
ARTN	ENSG00000117407
IPO13	ENSG00000117408
DPH2	ENSG00000132768
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411
CCDC24	ENSG00000159214
SLC6A9	ENSG00000196517
RP5	ENSG00000230615
KLF17	ENSG00000171872
DMAP1	ENSG00000178028
ERI3	ENSG00000117419

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_05099	chr1:44460574-44463399	Brain_Cingulate_Gyrus
SE_24883	chr1:44460573-44461454	Colon_Crypt_3

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I043994

chr1

44460472

44460873

Enhancer Sequence

CACTGTGTTA GCCAGGATGG TCTCGATCTC TTGATCTCAT GATCCGCCCA TCTCAGCCTC 60
CCAAAGTGCT GGGATTACAG GCATGAGCCA CCTCGCCTGG CCGACCCTGT TTCAAAAATA 120
AATACCTTGA CACAGGGGTA GCCTGTGTCA GAGGATTTTA AGCAGCGGAA GGGCTGTGAT 180
GTGGGGGAAG ATGGAGGCAA GAAGAATCAC AGTGCAGAAG TGTGGGAGAG AGAAGGATGC 240
CTGCCAGGGT GAGGCAGGCG AGGGGAAGAT ACTTCCTGCC CAGAAAGAGC CTCACAGGGG 300
CCAGACGTCT ATGCTGGGTC AGCCCCCAAG CAGCAGAGGG CAGTGTGGGC TGAGGAAGGA 360
CAGGTTGGGT GGGGCTCCTG CTGAGGCTGG AGGTTGGGGC CATGTGGTGG ACTCAGCTGA 420
GCCCTGGTCC TGTGTCTCGG GTTCTGGCTG CTGCTCCCTC 460