EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-01258

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:28345630-28347160

Target genes

Number: 13
Name	Ensembl ID

PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
SMPDL3B	ENSG00000130768
XKR8	ENSG00000158156
RP11	ENSG00000227050
AL512288.1	ENSG00000240750
EYA3	ENSG00000158161
RP5	ENSG00000228589
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:28346621-28346634

CAAACCACTTAAT

6.1

Enhancer Sequence

CGCGCCACTG CACTCCAGCC TGGGCGACAG AGTGACTCAG TCTCAAAAAA TAAATTAAAA 60
AAAATTAAAA CAACAAAAAC AAAAACAAAT TTCCTAACTA TCCAGAGTAA CTTTATTTTC 120
TATAGCACGT TTTGCTTCAG GGGAACTAAA GGACTCTTAA GGGCTTACTT TCCTAAACAT 180
AACAACTAAA TGAAATAGGT TTTATAGCTT TACAGAAGGT ATTTTCTTTC AACCAATATT 240
CACCTTCTTT CCTACTGTGG CTTAAGCCAT CCTTTTTCCT AAGAGGAAGC ATCAAAACAT 300
GACAATATAC AGGGTAACTG ACTCTGTAAA TGGTTTTAAC CATTCTTGTA GGAAAAGAAT 360
TTTGAATGGT TTCCAGATTT TGTTATCAGT ACATTATCCT AGGCAGGCCT GCAATAAAAC 420
TGAACACAGG TGATTTAAGG TGGGAAATAA AATAAAGAAT TGATTTAATC ATTTATCTTC 480
CCCAGCAAGT CCATTTTTAG TTCAGTTTTC TTCTGGCCCT GGTCCTGGCA TACAATCCTC 540
TTTTTCACCT ATTGATCTTT AATTCTGTCC TACCTTCTCC ATATCCTTTT TTTCTTTTTT 600
TTGAGATGAG TATCACTCTT GTTGCCCAGG CTAGAGTGCA ATGGTAGTCT CGGCTCACTG 660
CAACCTCCGC CTCCCGGGTT CAAGAATCCT CCTGCCTCAG TTTCCCAGGT AGCTGAGATT 720
ACAGACATGC ACCACCAAGC CCGGCTAATG CTGCATTTTT TTTAGTAGAG ATGGGTTTCA 780
CCATGTTGGT CAGGGTGGTC TTGAACACCT GACCTCAGGT GATCCACCCA CCTCAGCCTC 840
CCAAAGTGCT GGGATTACAG GCATGAGCCA CCACGCCCGG CTACTTCTCC ATAACTTAAT 900
AATGGTGGGA GGTACAACTC AGTCATATCT GATCTCTATG GGGGAAAATG TACTCTGATT 960
GACAAGGTGG TTTTACAAAT CTAACAATTT TCAAACCACT TAATGAATTG TACTGGAGGT 1020
AAAATGGTAG ACCTTAAAAA CAACTAGCCA TAAACTCTTA TTATATCCCG GCTAGAAAGT 1080
TTAATGGCTT GATTAGCTAG TTGATAACTC TGAGTTTTTA ACAAGTACTG TATTAAAATC 1140
ACAAATTTCT CTGAGCAATA GTTGGCTTTT ATTATAGGGG AACTTGGTCT GCTGACCCAG 1200
AAAGTTCATA GGGCTTAATA ACACTTTTTT CTCCAACTAA GCCAAATTAT TTCTAACATG 1260
TGCCACTCAT TCATTCAGCA AACCCATTAA GTATATCAGG GTCAACTATG TGCCTAGAAA 1320
CCATTTCAGC CACTGAAGGA TAAAATAGTA AGACAAAGTC CTGGCCCTCA AGGAGTTTAA 1380
ATTCTAGTGA GGGAAGTTAG TCAATAATTA AGTAATTTTT TTAGGCTCTT ATAACCACCA 1440
TAGAACCCAA GGCAAACTCG CCTAAAAATG TATACAACCA CTGCCTGCCC TACCCCACAT 1500
ACAGCTATGA CTAAAAAGCC AGGCACTTTT 1530