EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-00612

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:15832820-15833390

Target genes

Number: 15
Name	Ensembl ID

RP3	ENSG00000228140
EFHD2	ENSG00000142634
CTRC	ENSG00000162438
CELA2A	ENSG00000142615
CELA2B	ENSG00000215704
CASP9	ENSG00000132906
DNAJC16	ENSG00000116138
SCARNA21	ENSG00000251866
AGMAT	ENSG00000116771
RP4	ENSG00000237301
CHCHD2P6	ENSG00000235084
DDI2	ENSG00000197312
RSC1A1	ENSG00000215695
PLEKHM2	ENSG00000116786
RP11	ENSG00000237938

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZIC1	MA0696.1	chr1:15833187-15833201	CACAGCAGGTGGCC	-	6.33
ZNF740	MA0753.2	chr1:15832951-15832964	CCGCCCCCCCCAA	+	6.54

Enhancer Sequence

CACACCTGTA ATCCCAGCTA CTCAGGAGGC TGAGGCAGGA GAATTGCTTG AACCTGGGAG 60
GTGGAGGTTG CAGTGAGCCG AGATCGCGCC ACTGTACTCC AGCCTGGATG ACAGAGTGGG 120
ACTCTGTGCC CCCGCCCCCC CCAAAAAATA AAACAACAAA GGGCCCAACC CAAACGCCTG 180
GGCAGAGCAC TTTCTCGGTT TCCCAGGGCC AGTACCGAAG TGCTGACAGT CCCAGCAGTC 240
GTAATAGCCA CCATTTTTGG GGAGAAGGTG CTACGCTTGG GCACTGTTCA TCTAACCCCC 300
AAAACAACCC AAGGAGGCAG GTACTATTCC TGCTTTCCAG ACAAGGAAAC TGAGGCACAG 360
GAGGTCACAC AGCAGGTGGC CGAGAGAGCC AGTCCTCAAA CCCGGACTTC TGCGTCTGAA 420
CTTGAACCTG TAGCCGCTGG GCCGTCCTAC CTCCCATGGT CCTCCAGATG TAAGGGCTCG 480
CCTGGGGAGT CAGCTGGCTT TTGGAGTCCC TCAAAAGATA CTTCCCCACC CACTGCCCCC 540
CACCCTGTCT CCCTCCACAG ATAGTGAGTG 570