Tag | Content |
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EnhancerAtlas ID | HS084-02255 |
Organism | Homo sapiens |
Tissue/cell | HCT116 |
Coordinate | chr19:6515090-6518640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:6517054-6517073 | GGTCCACCAGGGGGCGCCC | + | 7.12 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | + | 6.28 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | - | 6.93 | KLF14 | MA0740.1 | chr19:6516124-6516138 | AAGTGGGCGGGGCC | - | 6 | KLF14 | MA0740.1 | chr19:6516196-6516210 | AAGTGGGCGGGGCC | - | 6 | SOX10 | MA0442.2 | chr19:6518436-6518447 | AAAACAAAGCA | + | 6.02 | SP1 | MA0079.4 | chr19:6516044-6516059 | AATGGGCGGGGCCTG | - | 6.28 | SP1 | MA0079.4 | chr19:6516125-6516140 | AGTGGGCGGGGCCTG | - | 6.76 | SP1 | MA0079.4 | chr19:6516197-6516212 | AGTGGGCGGGGCCTG | - | 6.76 | SP2 | MA0516.2 | chr19:6516043-6516060 | AAATGGGCGGGGCCTGG | - | 6.05 | SP2 | MA0516.2 | chr19:6516227-6516244 | AAGTGGGAGGGACTAAG | - | 6.87 | SP2 | MA0516.2 | chr19:6516124-6516141 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP2 | MA0516.2 | chr19:6516196-6516213 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP4 | MA0685.1 | chr19:6516042-6516059 | GAAATGGGCGGGGCCTG | - | 6.8 | SP4 | MA0685.1 | chr19:6516123-6516140 | GAAGTGGGCGGGGCCTG | - | 7.51 | SP4 | MA0685.1 | chr19:6516195-6516212 | GAAGTGGGCGGGGCCTG | - | 7.51 | SREBF1 | MA0595.1 | chr19:6515195-6515205 | ATCACCCCAC | + | 6.02 | TCF7L2 | MA0523.1 | chr19:6518315-6518329 | TGCCTTTGATGTCA | - | 6.22 | ZNF263 | MA0528.1 | chr19:6515276-6515297 | GGAGGAAGGGTGGGGTGGAGA | + | 6.38 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_04576 | chr19:6514942-6515730 | Brain_Anterior_Caudate | SE_04576 | chr19:6515779-6517785 | Brain_Anterior_Caudate | SE_04576 | chr19:6517811-6518594 | Brain_Anterior_Caudate | SE_05428 | chr19:6514842-6518872 | Brain_Cingulate_Gyrus | SE_06410 | chr19:6513667-6518095 | Brain_Hippocampus_Middle | SE_07190 | chr19:6513827-6517835 | Brain_Hippocampus_Middle_150 | SE_08344 | chr19:6514848-6518047 | Brain_Inferior_Temporal_Lobe | SE_59187 | chr19:6504315-6557596 | Ly3 | SE_60909 | chr19:6515936-6539276 | DHL6 | SE_61349 | chr19:6504438-6557049 | HBL1 | SE_62127 | chr19:6504461-6555983 | Toledo |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 6516049 | 6516950 | chr19 | 6517219 | 6517572 | chr19 | 6518135 | 6518457 | chr19 | 6518032 | 6518368 |
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| Number: 2 | ID | Chromosome | Start | End |
GH19I006515 | chr19 | 6515621 | 6517670 | GH19I006517 | chr19 | 6517741 | 6518832 |
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Enhancer Sequence | TCTTGGTGGT GCCGGAGTTC TGGTGACAGT GGAGTGGCTG GGGGGCATCC TGTGCCAGTC 60 CCCAGGCCAC TGGTGCTGAG AAAGGATTCC TGCTGGGGTG GGGCCATCAC CCCACGTGGT 120 GACCTTTTCC ACGTCAGGGG AGCAGAGGGC TTTGGGATGG GTTCACCCAC TCAGACCAGG 180 CCTCATGGAG GAAGGGTGGG GTGGAGAAAC CAAGGCCTCC GTAGCTCCTG TTAGTGATTT 240 AAGACACAGC CCCCACCCCA CACCAGGGGC GTGGCAGGTC TGGGGTGGGG TCTTGGTGGA 300 TGTACATGCG GATTATGGGT GAGGGCAGAG CCTGCATGTT TGGAGGGCAG AACGAATGGG 360 GCAAGGCCTA AAGGAATCAA AGGGCGGCTG CAAGTCCCAG CGAAATTGGT GAGGGATGAG 420 CATGGCTTGA AAACCTGGAG TGGGAAGAGG GTGCAGGACT CCGGAAGGGC AGAACCCAGA 480 AAAGGGGCTA GGGGTTGAGA CAGGACAAAC CCTCAAAGGG GGAGAGGTGC CGAGCCTGAG 540 GAGAGGGTGG TATGGACTAA GAAAAGCAGA AAAGTGCCAG GCGCGGTGGC TCACACCTGT 600 AATCCCACAA CTTTGGGAGG CCAAGGTGAG TGAATCACCT GAGGTCAGGA GTTCGAGACC 660 AGCCTGACCA ACATGGTGAA ACCCTGTCCT TACTAATAAT ACAATAAAAA AAAAAAATTA 720 GACGGGCGTG GTGGTGCATG TCTGTAATCC CAGCTACTCG GGAGCCTGAG GCAGGAGGAT 780 CACTTGAACC CGGGAGTCGG AGGTTGCAGT GAGCCGAGAT CGCACCATTG CACTGCAGCC 840 TGGACGACAA GAGCAAAACT CCGTCTCCAA AAAAAAAAAA AAAAAAAAAA GCAGAAAACA 900 GAGTGGGGCA CGAAGAGTCT CCAGGCCCTA TTCCCAGGTC ACTAATGATT GGGAAATGGG 960 CGGGGCCTGG GAGAATGACA GGGAGGTGTG AGGGACTGAG GAGTGGGCAG GGTCTGGGAG 1020 GCTGATAACA GGGGAAGTGG GCGGGGCCTG GAGATAATAT TGGGAGGAAC TGTGGCGTGG 1080 GAAGGGCCTG GAGCGGACAG CAGGGGAAGT GGGCGGGGCC TGGGGAGAAT GACAGGGAAG 1140 TGGGAGGGAC TAAGGAGTTA GCAAGGGCTG GGAGACAAAT AACTATGAAG TGGGCGGAGT 1200 CTAGGGAGAA TGACCGTGGG GTAGGGGAAC TGAGGAGTGG GCTGGGCCTG GGAGTCTGCT 1260 GGGGAAGCGG ACGGTCCTCG AGAGAATGAC AGGAAAGTGG GAAGGACTGA GGAGTGGGCA 1320 GAGCCTGAGA GGCAAACGGA TGGGTACGAG GGCGGGGCCT GGGGAGAAGC TAGGGAGGTG 1380 GGAGGCGGAT GACAGCGGAA TGGGGCTTCG GTAGACTGAC AGGATCAGTC GTGGAAGGGG 1440 CGGGCCCATC TTTCTCTTGA ACCCGCGAGC CAAAGCCACG TTGGTGCTGG TGATCATCCA 1500 GGCTGAGCGC TGGGCATTCC CAGTCTCGGG CGATTTCTTG GCGTTACTTC CAGGCTGAGA 1560 GCCATGACTA GGCGAGCTTC GGCCGTGGGA CCGAAGACCT CCCACCCTCA GCACTCTAAC 1620 CTCCCCGACC CTGCCCTCGC TGTGCCTCGT TGGGAATCCG CCTCCGGGGT CTTCCGCGGT 1680 CCAGGAGCCG CACCTGCCGG GTGGAGACGC GGGGCTGGCT GGGGTGCGGG AGTAGGAGGT 1740 CTTCGGTCCA ACCGCCTCCA ACCCATTCCT GCTTCCGACG TTCTGTTCCC GCGCTTAATG 1800 CCCTGCCCGA TCCAGTTCCG GCCTCCCATC TCCCCTTCCC GCGTCTCCAC GCTCTTTCCT 1860 TCCCCGGTTC TGCCGTGAAT GCTCCCAAGT CCTAGAGCAC CGGAACTCCC CGCGCGCCTT 1920 GGCTCCTGGG CCCCAGCTCC GTGCAGTCCT GGACTGGGGC TCCAGGTCCA CCAGGGGGCG 1980 CCCGCTGCCC AAGCTGGGTA TCGCTGCGGA GAAAAGGGGC CCAGAGTGAT TGTTCCTCAG 2040 GGGAGGGAGG GGGAGGTCCC CAGAGGGAAG GGCCTGAGTT TCCTCTTGGG GGATGGATCC 2100 TAGGTGGTCT GAGGGGTGAG TCCTGGGTTC CCTGGCGGGA GTGGATCTTG GGTGGTCCTC 2160 TGTGGGTACA GGGTGGAACT TGGGTGTTCT GAGGGGTAGT CCCTGGGGAC TCCTCTGGGA 2220 GCGGGGCAGA CCTTGGATGG TCGTAGGATT GGACCTGGAC CTCTGTGTGT GTGATTGTGC 2280 ATGCCCATAA CGTGTGTTCT TGCGTTATGT CTATGACTAG CCATGGTGCC TGCCATGTAT 2340 GTGTATCTAC GATTGTGTCT TTGGGTGTCT GTCTCAGTGT GTAACCGTGT ACGTGTGTGT 2400 TGTGTACCTC CATGTCTGTT TTGGTATGTG TGTGATGGTG TGTCTGTGTT GGTGTGTTCT 2460 AGTCTCGGTG TGTTTGGTTA TATGCCCTGA ATATATGTCT CTTGTGTCCT TGTGTGTGTC 2520 TGTTGCTAGC TTTTTTTTTT TTTTTGAGGC AGAATCTTAC TCTGTCATCC AGGCTGGAGT 2580 ACAGCGGCGC CATCTTGGCT CACTGCAACC TCTGCCTCCC GGGTTCAAGC GAGTCTCCCA 2640 TCTCAGCCTC CTTAGTAGCT GGGACTACAG GCACTCACCA CCACGCCCGG CTATTTTTTT 2700 TTTTTTTTTT TTTTTGTATT TTTGGTAGAG ACAGGGTTTC ACCATGTTGG CCAGGTTGGT 2760 CTCGGACTCC TGACCTCAAG TGATCTGACT GCCTTGGCAT CCCAAGGTGC TGGGATTACA 2820 GGCGTGAGAC ACTGCACCCG GTCTGTGGCT AGCTTTGATG GTTGTTGTGT ATCTATGATT 2880 GTGTGTCCAG GTGTGTGTGT GTGTGTGTGA TTGTGTGTAT GTCTGCATGG TGTGTCTGTA 2940 TGTCTGTCTT GTTTTGTGTG ATTGTATATG TCCAGAATGG GTGTGCCCTT TGTGTTCTGG 3000 TGTCTGTGTG TGTCTACTTG TGTCCCTCCC CCAGGGGAGT TGGAAAGTCC TTTCCAGGTA 3060 GTTACCCTGC TGGGATTCCC TTTCCAAAGC GGGTTGACTT CCCAGCACCG TGAGCTGCCT 3120 CTTCATGCTC TTGGAAGGGG TCGCTGGGTC TGCCCCAAGT CTGCCTGGGT CTTCCCCAAC 3180 CCTGACTCCT CCTTCCACTG CCCTCAACAG GGAAACACCA TTTCCTGCCT TTGATGTCAC 3240 TAGGTACAAA AAGTTTCCTT CCTCCAAGTG GCTCTGGCCA CTGGTTTCTT TCTGCGTGTG 3300 TGAAAGCTGG CCACGATTCT GTGCTTAATG TTAAAACAAA AAGAATAAAA CAAAGCAAAC 3360 AAAACGAACC CATGGAAAAT GCAAGCATGC AAAATCATAC ACCATGAAAC ATCCACATCT 3420 TCTCACCCCA ATACCCTCAA TTTTTGCACA TCTTTCTGAA ATGTTTTATA CAAACCTATT 3480 TCTGCTCTGA AACCCAAAGC GTGCATTCTG CACATAGCAG CCTGCACCTT GCTTTCGTTT 3540 CTTTTTTTCC 3550
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