| Tag | Content |
|---|
EnhancerAtlas ID | HS083-00228 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr1:200875090-200876960 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr1:200875430-200875445 | GAGGTCAGGAGTTCA | + | 6.22 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_23181 | chr1:200874811-200875442 | Colon_Crypt_1 | | SE_23181 | chr1:200875626-200878812 | Colon_Crypt_1 | | SE_24573 | chr1:200876333-200878783 | Colon_Crypt_2 | | SE_25202 | chr1:200875656-200878870 | Colon_Crypt_3 | | SE_27435 | chr1:200875065-200878791 | Esophagus | | SE_27875 | chr1:200876612-200878481 | Fetal_Intestine | | SE_28769 | chr1:200876016-200879782 | Fetal_Intestine_Large | | SE_33981 | chr1:200873398-200878744 | HCC1954 | | SE_50836 | chr1:200873411-200875646 | Sigmoid_Colon | | SE_50836 | chr1:200875691-200878781 | Sigmoid_Colon | | SE_52641 | chr1:200873442-200875476 | Small_Intestine | | SE_52641 | chr1:200875601-200878779 | Small_Intestine |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I200906 | chr1 | 200874781 | 200875150 | | GH01I200907 | chr1 | 200876801 | 200876990 |
|
Enhancer Sequence | TTTGTTGAAT GTATAACCTA AACCACGTTA CTCAACTCCT CTGAGACGTG GTTTCCTCAA 60
CTGTCACTTG CAGGTGATAA TATCTACCTT ACGTGGTTGT TATGAGAATT ACCTGAATTA 120
ATATATATAA AGTGCTGTAT TTAGAAATGT ATTGGCACAG TAGAAACATT AGCAATTATT 180
ACTTTTTCCT CATCTTCATT CTCAAACACA GTTGAAAATG TTTCGTGAGT TCCATCCAGG 240
TCACTTTAGG CTTATTCTCA AGATCTGAAG GCCTGGCCGG GTGTGGTGGC TCACGCCTGT 300
GATCCCAGCA CTTTGGGAAG CCGAGGTGGG TGGATCACCT GAGGTCAGGA GTTCAAGACC 360
AGCCTGGCCA ACCTGGCAAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA GCCAGGCATA 420
GTGGTGTGTG CCTGTAATCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAT CGCTTGAACC 480
TGGGAGGTGG AGGTTGCAGT GAGTCGAGAT CACACCACTG CTCTCCAGCC TGGGTAAGAG 540
AATGAGACTC CATCTCAAAA AAAAAAAAAA AAAAAATCTG AAGGCTTAAG TTTCTTCAAA 600
AGCAATAGCA CAAATGAGTT CCCTCTGATT TCTTAGGTAA AAAGTGCTGC TATACCATGA 660
AGTAAAGTCA CACTGAATTT CCTTCAGGTG ACTTGCCAGA TCACCAACTG AAGAAACTTC 720
CCTGGGGCCA GCTGGCCAGA CCTTATCTTA AATTCAAATT CCTACCTTGC GTTCCTCTTG 780
TTGTTGGTAA CACAGGAGGT CTCACATTGG GATCTTTGAA TTGTGTTTGT GATGTGAGAT 840
GATTATACAA AAGTTAGAGT GAAATTCCCT TTTTTTTATT TGAGACAGGG TCTCACTCTG 900
TTGCCCAGGC TGGAGTGCGG TGGTGTGATC ACGGCTCACT GCAGCCTCGA CCTCCCAGGC 960
TCAAGTGATC TTCCCATCTC AGGTTCCCAA GTAGCTGGGA CTACAGGCAT GCACCATCAT 1020
GCCTGGCTAA TTTTCGTATT TTTTGTAGAG ACCAGATTTC ACCATCTTGC CCAGGTGGGT 1080
CTTGAACTCC TGGGCTTAAG CCATCTGCTG CCTTGGCCTC CTAAAATGCT GGGATTACAG 1140
GCATGAACCA CCGCGCCTGG CCATGAAATT CTTTTTATCC TAAGGGCCTT CCAAAATGAC 1200
CCTTTGTCTT TCCTTTCCAC TACCAAGAAG CCCTGCCAGA GGACACCCTT TTTCTTTTTT 1260
TTTGACAGGT GGGGAAACTG AGGTCTAGAG CATTGAAATG GTTTATTCAA GGTTGCATAG 1320
CTAGTATCAG AGTCAGGATT AAAATCAGGT TTCCTGTCTC CTAGCTCTGC CTTCTATTTT 1380
TTTCTACTTC CATGTAGTAA GTTTACAGCC AGGCCAGGCA CAGTGGCTCA TGCCTATAAT 1440
CCCAGCACTT TGGGAGGCCA AGGTGGGATG ATCACTTGAG CCTAGGAGTT CAAGATCAGC 1500
CTGGGCAAGA CAGCAAGACC TCTTCTCTAC AAAAAAAATA AAATAATTTA GCTGGGTGTG 1560
CTGGCATGCC CCTGTGGTCT CAGCTACTTG TGAGGCTGAG GTGGGAGGAT CCCTTGAGCC 1620
TGGGAGGTCA AGGCTGCAGT GAGCCATGAT CACACCACTG CACTCCAGCC TGGGCCACAG 1680
GGTAAGACCC TGTCTCTTAA AAAAAAAAAA AATCACTCCC AATGTGTATT TAGCACACAG 1740
AGGGTATTTC CTCATAACTG ATGCTGTCCT GGGGGAGTGA TCAGGCCTGA GCTGCTCAGC 1800
ACTGCTGGTT ACTCATATCT GTTTGTTCAT TTCTTCACTT CCTTCTCTTC TCTCCCCTTT 1860
GTCTTTCGCA 1870
|
