| Tag | Content |
|---|
EnhancerAtlas ID | HS083-00068 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr1:33225090-33226240 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NRF1 | MA0506.1 | chr1:33225977-33225988 | GCGCATGCGCG | + | 6.02 | | NRF1 | MA0506.1 | chr1:33225976-33225987 | TGCGCATGCGC | - | 6.32 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_00938 | chr1:33222414-33228190 | Adrenal_Gland | | SE_23116 | chr1:33222486-33228088 | Colon_Crypt_1 | | SE_23802 | chr1:33222504-33226232 | Colon_Crypt_2 | | SE_24863 | chr1:33222528-33228040 | Colon_Crypt_3 | | SE_26629 | chr1:33222485-33229909 | Esophagus | | SE_28121 | chr1:33222417-33227824 | Fetal_Intestine | | SE_29204 | chr1:33222398-33228161 | Fetal_Intestine_Large | | SE_31442 | chr1:33222462-33229259 | Gastric | | SE_32998 | chr1:33223526-33226355 | H1 | | SE_34017 | chr1:33222554-33228332 | HCC1954 | | SE_34529 | chr1:33222552-33228376 | HCT-116 | | SE_35127 | chr1:33222959-33228343 | HeLa | | SE_36587 | chr1:33223549-33228428 | HMEC | | SE_41588 | chr1:33222566-33226346 | LNCaP | | SE_47530 | chr1:33222541-33226234 | Pancreas | | SE_50335 | chr1:33222444-33228176 | Sigmoid_Colon | | SE_52480 | chr1:33222435-33228203 | Small_Intestine | | SE_57426 | chr1:33223423-33225871 | VACO_503 | | SE_57426 | chr1:33225936-33227972 | VACO_503 | | SE_58210 | chr1:33223397-33226212 | VACO_9m | | SE_64801 | chr1:33223137-33228360 | NHEK | | SE_65538 | chr1:33222454-33228028 | Pancreatic_islets | | SE_68878 | chr1:33223357-33227762 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I032756 | chr1 | 33222380 | 33229159 |
|
Enhancer Sequence | TATCGTAGCT AATTCCTCCG TGCACTACTG CCTGTTCCCC CAGGGCACCC TGTGGGATGG 60
GCTCCTCCCC TCCCTGCTCT GGGCACTCCC TGCCCCCCAT TATTTACCTT AGAACCGGCC 120
TGTCAGCTCT GTCCCTGCTG GGGTGGGGCT GGACACCAAG GGAAGGAAGG AGAGGGATTC 180
CGGCACAGGT GGGGTGCAGA GCCCCTACTT TCTTTGGGCA GAGATTGAGG TCGTGCCCCT 240
CCCCCAACTG CCCTTACCCA TTAACTTTCT CAGACTTAGG ATCACTAAGG TTGTTGGAGT 300
GAGACCCAGG TTCAACCACT CCCTGGTTGG GTGACCTTGA GCAAGTTAGT CACTTTCCCT 360
TGAGCCTCCT GGTGCTCATT TGTAAAAAGG AAACCACTCC TGCCTTTTAA CTTTCTTGTT 420
AGGTGTTCTG CGAGACAGTA GAAGAGAAAG TGTTTTGAGA ACCGTAAAGT GCCTCCACCT 480
GAAAGTTTGT TATGCTCATT TTCCTTTGTC TTGCCTCTTT GGGAATAAAA TCTACATTCT 540
GGTTTCTGCT TCTGCTTCTA GAATGTGTAA TGGTTGGGGA GCGGGGGCCT TCGTTTGTCC 600
ACCTGTGCAG TGAGGGGTTG AGGCTAAGGG CCTCTGAACA CCCAGCATTC TGGCTCATGG 660
GCTGGCCAGG GACAGTTCAG ACAGGAGTAG GGAGTTGGGG GCTGGGTTGG CTTCAGAGGG 720
TTCGGCCTCC TGAGCAAGGC CACCTGGACA GCTGTGCCCT CCCCCTTCAT TCCTCTCCCC 780
TGAGTCAGGC CTGCCTGGCT GTGGGCGCGC CACCACCCCC GCCCCTTGCT CTGGAATGGG 840
GCAGGTTGAG GCCTCACCCC ATGGAGGATG TTGCCAAGAC AGTGCGTGCG CATGCGCGTG 900
GCCTTGGGAG GCAGTGGCTC CCTCCCCGAT TCTTCCCTTT CCCCAGGCTT AGGAAAGCCC 960
CTGAGTAGGG GCTACACACA CCTGTTTTTC TGTACACACA GCCCCTTGGC AGGCCCTGTG 1020
TGGGTCTGTG CGGTCGCTCA TGGGTGAGGA AGGCAGGGAC TAGGGTGGCT TAGGTGTGCT 1080
TTATGGGTGT GTGTGTGTGT TTTTTTTTTT TTTTTGTTTG AGACCGAGTG TCACTCTGTC 1140
ACCCAGGCTG 1150
|
