| Tag | Content |
|---|
EnhancerAtlas ID | HS080-00429 |
Organism | Homo sapiens |
Tissue/cell | H9 |
Coordinate | chr1:19727230-19728810 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr1:19728661-19728674 | AGCAGCTGTTCCC | + | 6.92 | | Tcf12 | MA0521.1 | chr1:19728660-19728671 | CAGCAGCTGTT | - | 6.32 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_01631 | chr1:19723726-19729381 | Aorta | | SE_05833 | chr1:19726303-19729509 | Brain_Hippocampus_Middle | | SE_18410 | chr1:19725443-19729168 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_25786 | chr1:19726004-19729195 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19725748-19729360 | Esophagus | | SE_28668 | chr1:19726413-19727893 | Fetal_Intestine_Large | | SE_31164 | chr1:19727698-19729374 | Fetal_Thymus | | SE_31447 | chr1:19728502-19729355 | Gastric | | SE_42185 | chr1:19725760-19727652 | Lung | | SE_42185 | chr1:19728376-19729307 | Lung | | SE_45720 | chr1:19723558-19729015 | Osteoblasts | | SE_46635 | chr1:19726583-19727639 | Ovary | | SE_46635 | chr1:19727710-19729284 | Ovary | | SE_48688 | chr1:19726341-19727652 | Right_Atrium | | SE_50058 | chr1:19726388-19729383 | Sigmoid_Colon | | SE_51211 | chr1:19725539-19727979 | Skeletal_Muscle | | SE_52345 | chr1:19725640-19727680 | Small_Intestine | | SE_52345 | chr1:19727683-19729384 | Small_Intestine | | SE_54550 | chr1:19726107-19728569 | Stomach_Smooth_Muscle | | SE_65446 | chr1:19728630-19729569 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019397 | chr1 | 19723770 | 19729243 |
|
Enhancer Sequence | AAATGAAGGA CCTGGATAGA TCTTGTAGGA AAAAAAATCC TATGAGGACA AGGCCAAGGA 60
ACGGGCCTAT ATGCACTTCA CTTGAATTAT GCCTCCTGGC TCTAGGTGAC AAGAGCCATC 120
TTTTTCACCA CTGGAGAGCT CAGCCTCCTA CCACCTTGCC CCGATCCTGA CCTGGTTCAG 180
ATTCCTCGCT AACATACTTC TCTCACCTTG TAGCACTGTT GCACATTGAA CAGGAGGGAA 240
AAGCTCTTTT GTTCATTTTC CTTAGAATGG AACCAAAATG ATACTCCAGT AGCTCCATCT 300
AAAAGCTCAA GTGGCAGCTA ACAGCACGGA CACCAGGGGC ATCCCTTGCC AGCTTCCAAT 360
GCCATGGTGA GAGACACTCA TCATGGTTTA AAAAAAGACC AGAGAGCATT TTCACAAGCA 420
ATTCCTAAGA GACTTAAATT TCCTACACAT AGGCAGAATA AAAACCAAAA AGGAAAAAAA 480
AAAAACTTCC CCCAAACAAA AGTGAGGGCT TTCAAGGAGA CTTGCTGAGT GGGCAAACAT 540
TTTGGAAAGA TGGAATTTTA AACACAAACA CAAAAGGGCA AAGATTTGCA GCAGAAGAGC 600
TATGCACACA GCCGGGAGGA CTTTAATTAG GGAAAGCTTT GCAAAGCCCA GGGAGCATCA 660
GCATCGGCAA ATCTCCCCTT GGTCTCCGGA ATGGAAAGAA TGTGGAAACC AATGGGTGAT 720
CAAGGAGTTC GAATTTTGCC TGACACTCTT GCTGGGAATG AAGCATGCAG TCCTGTCTTT 780
TGCCACCTTT TCAGCAGCCT CAGGTGAGCC TTTTAAAAAG GTGAAAAACG AAGGACCACC 840
TAGCCTGGGA GAAGCCAGGG TGGATCCTCT CCTTCCTAGG GTGCTTCCTG CAGATGGCAC 900
ACAGCCAAAG CTCTTCTGGT GTTTTAAGGC AGAAACAGAA TTCAGGGGAG GACTAAACAA 960
CCCCTTTAGA GCTACGTGCT GTGTTTTTTG TTTGCATTTT TCCAAGTCCA GGCATTTTTC 1020
CAGGTATTTC CAATGAGACT GAAATGGCCT ACACATAGGC TGACGACCTA TAATAACATA 1080
AGAAAGTGAT GTTGGCCCCC TGCTCCACCC AGAGGGGACA TCTGCTTATT TGGCTTCCAG 1140
GTGGTGGGAG CAGTGGTTTT CCCCAAACAG CTAATACCCT TCAATTCTTT GCTTTCTGTA 1200
TCATGAAGTT CACTGGAGTT TGGAGCACAG ACTCTTTAAA CCAGTAATTT AACTCTACTT 1260
TTGAGGATAC CCTATGCCCC CAGCAGTTAT GAGAAGGGTT GCCAAATCTT AACTCATAAG 1320
GGTGACAGGA TCAGGAACAA AGGCCTGGAC TCTCCACCCT TCTCCTCTGC CAAAATCTAC 1380
GAGTTCAGGA AAATGGCAAG CCAGGAGTTT ACTTTAGGTT CCCTCAAGAG CAGCAGCTGT 1440
TCCCACCAGG GCTGCGAAGG AATCAACAGG AACTGAGAGA ACACCTGAAT GGTCTGATTC 1500
AGAAAGTCCC AGCTCCCTGT GAGGTCAATA AAGAACTTTG TCTCAACAGA GGCAACAAGG 1560
CCACTGCCTC CTAGGAAAGG 1580
|
