EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-39808

Organism

Homo sapiens

Tissue/cell

Coordinate

chr3:49202350-49203690

Target genes

Number: 29
Name	Ensembl ID

CCDC72	ENSG00000232112
SHISA5	ENSG00000164054
UQCRC1	ENSG00000010256
SLC26A6	ENSG00000225697
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745
PRKAR2A	ENSG00000224424
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
CCDC36	ENSG00000173421
RP11	ENSG00000225399
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs4499638

chr3

49202782

hg19

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PBX1	MA0070.1	chr3:49202809-49202821	ACATCAATCATA	+	6.11
RREB1	MA0073.1	chr3:49203561-49203581	GGGTGGGGGTGGGGTGGGGG	-	6.74
RREB1	MA0073.1	chr3:49203560-49203580	GGGGTGGGGGTGGGGTGGGG	-	8.54

Enhancer Sequence

CCCAGACTTA CACCCACTGT CCATGCCCAT CTGTTTCTCC AGCTGCTGCT GTTCATGTGT 60
GGAGCTGGAG TGGGGTGGGG GAATCTCCCT GCCCACCAGA AGTTCTGTTT TCAGTCTCTA 120
GACAGGGTAC TCAGCAACCC ATTTTCTAGC TCCAGAGGCA TGGAGACCTA ATCAAGAGTC 180
GGACTTTTCT TCAACAGAAA CTAAAAAGCT GATGAGTAGC AGGTGCCAAT GACATCTCTC 240
TAGGCAACCA GGCAGACCAG GGACCAGGAA GCCAGACCAA GATCCCAAAG TTTAAGGACA 300
ATGGGAGCCA AAGGCTGCAA GTAGGATGGT GAGTCAAGGG GACATTAGCG GTATGCACTG 360
TCCTACCTAA GACTTGGAGG GCCACAGACC TCAGTACAGC CCAGATGGAG GTGACTGAGA 420
ACACCTAACT ACTCCCAGAC TTCTTTAAAG AAGCTGTGGA CATCAATCAT AACTAACATC 480
TAATACCCAA CCCAACACTG AGGGTTCCCA GAAGCAAGAG GCAGCTCCCC AGCTGCACCA 540
GAGCATTAAA AGATCAGCCA GGATCAGGCA GGTCCCTCGG GCCATGAGGC CCGTCTGTGT 600
AGTTTCTTCC CACCGCTCTA ATGCAGCAGA TGAAGTCTTC AGAATACCCT GGAGGAAATG 660
CCCTAGGGCT CTTTGTTTGG AAACATTCTT GGATCCTCAG GTGTCTTGGG CACTTCCCCT 720
CCCCAGAGAC CGTTCTCCAA GCACAATCCT TGCACATGAC TTTAGTTCTT TATTAATGTT 780
TTTTGAAGGG ATGTAGTTCC CAGAGCTGTG AACTGTAGAA GAGAGAGGGA CCTATTTCCC 840
ACCCTCACAC GCGCCCCAGC GCAAATATTT GGGGTGACCT GGGGGCTCTT CCACCCAGGT 900
TAGGCTGGGC TCTTGGGAGG GGTTTTCTGG GCTTTCGAGA AGCTTCGGAA ACAGAGGCTC 960
CTGCCCGGCC TCCGACTTCC CTTCACACGT GCCCCCGGGG AAGGCAGGAG AAGTTGACGG 1020
AAGATAGGGC GTGAGAGAGG CGCCACACAG GCAGACCGGG GGAGGGGGCA GATCGGGGCC 1080
CTCAGGCTGG GAATGCACGT CCTTAGGGCC CAAGCCGTGA GGCGGGGGTC ACTGAGGCAG 1140
CGAAATGTAC AGGGTGAACG GTGCTAGCCC TACCGGGACC GCACAGCCCC AGGGTGGGGT 1200
CGCTGGGCGC GGGGTGGGGG TGGGGTGGGG GGTCTCGGCC AGGCCGGCGG AGGACGCGGG 1260
TCCGGGAAGA GTTGGCCGCT TGCCCGTCCG CCCTGCCGCC TCGCGGGCCG CCCCTCCGCG 1320
GCGCGGCTAG GCCCGCGGCT 1340