| Tag | Content |
|---|
EnhancerAtlas ID | HS076-24270 |
Organism | Homo sapiens |
Tissue/cell | H1 |
Coordinate | chr17:27907060-27907840 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:27907499-27907518 | TGGCCACCAGGTGGCACCA | + | 9.7 | | IRF1 | MA0050.2 | chr17:27907778-27907799 | CTTCTGTTTCTTTTTCTTTTT | + | 6.6 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_03576 | chr17:27906928-27907885 | Brain_Angular_Gyrus | | SE_04273 | chr17:27904200-27907921 | Brain_Anterior_Caudate | | SE_05259 | chr17:27903394-27916333 | Brain_Cingulate_Gyrus | | SE_06486 | chr17:27903728-27916430 | Brain_Hippocampus_Middle | | SE_08195 | chr17:27903857-27916430 | Brain_Inferior_Temporal_Lobe | | SE_08898 | chr17:27907046-27907217 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907253-27907436 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907600-27907798 | Brain_Mid_Frontal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I029579 | chr17 | 27906961 | 27909521 |
|
Enhancer Sequence | CATGCAGCAT TTCTACCCTC CATGCCTCTG CCTCTCTTGC TGCACTCCCC CATGAGGACT 60
AGAATCACCT GGCTAGGCTG CCTCCCCAGC TAGATTGTGA GCTCCTTAAG GGCAGGGATT 120
GTGTCTCAGC TGCCTCTGTG CTCCCAGTGC CAAGAGCAGT AGCTGGCTCC GGGAAGGTGC 180
TCAGTTAATG TGCTGTTGAA TGGAGCCCAT ATTTGGGTGT ATTTACCATA CACATGCACG 240
CATGCACACA CAACCCAGGT AGAATCAGAC CATAGAAGTA GGAGCCTTGG GGTCTGGAAG 300
AGGTCTGGGT TTAGGATCTG AGTCGCCCAG GCCTGGTTAT GCCCATCTGC CCACACAGGC 360
CCTTGGGGAG GAGAGCACCT CCTCTCTCCA GATCCAGGCC AGCAGGCACA GCCTGGCATG 420
AGGACATGGC CATCAGAGGT GGCCACCAGG TGGCACCAGC ATCCATCTTA TGTGCTGGGT 480
GAGTGGCAGG GGGTGTCCCA CACTGCCTCT CAGACGGAAG CAGAAACACC TCATTCAACC 540
AGCCTCAGCG CACGTGCCTA ATTCTGAGCA CGCTAGAGGC CTAGCCAGCA GTCACAAAGT 600
TAGTCACATC CCTGAAGCCC ACCCATCTTT TCAGCGAAGA GCAGAGGCTT CTCTAAAGAC 660
AGTGGGGTCG GTGCCACTGG GACAGAACCC AGTGGCCCAC CCTCCCAGCC GGAGGTAGCT 720
TCTGTTTCTT TTTCTTTTTT TTTTTTTTGA GACGGAGTTT GGAGTTTTGC TCTTGTTGCT 780
|
