EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-04725

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:182570490-182571100

Target genes

Number: 3
Name	Ensembl ID

RNASEL	ENSG00000135828
RGS16	ENSG00000143333
RP11	ENSG00000261504

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:182570635-182570654	TTTCCACCAGGTGGCGCTG	+	7.84
NFIC	MA0161.2	chr1:182570980-182570991	TGTGCCAAGTA	-	6.32
NFIL3	MA0025.1	chr1:182570768-182570779	AGGTTACATAA	-	6.14

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_30080	chr1:182570595-182573606	Fetal_Muscle
SE_33596	chr1:182570162-182575443	H2171
SE_58767	chr1:182569958-182622446	Ly1
SE_61551	chr1:182562351-182619258	Toledo

Enhancer Sequence

TTGTGTGGCT CACTGTGACA TACACAGTGA CTGTAACAGT GTCTTGAATA TAATTGGGGC 60
TCAATACACC TTTACAGAAT TATGTGGAAT CAATCAGCGG TCAGAAAACA AAAATAAGGT 120
ACAAAAGTAA GGCATTACTC TTATCTTTCC ACCAGGTGGC GCTGTGTTCT TTAGCAAATG 180
CAGCTGCCAT GCGTTTAGCG GCCAGGAGAG AAGGTAGACA AAAAAATCAC AGACCACAGA 240
CCAGCAGGCC TCAGGCAGGT CAGCCTGGGG ACTGAGCCAG GTTACATAAG GTCCCTGTGC 300
TGACCTTGTC TCCCCAGTTG CTAAGTGTTT TGAGCCTCTA AAAACGGATG GGTTTATAAA 360
GGTGGGTATG GACAGAAGCC GAAAAACCTG CCAACACATC CTGCCCCATC ATGAGTCTTA 420
GGGTTAAGCA CCCAGGAGTG GCACTGGGCC TGGCTTTCCT AGTCTCTGGT CACAGAAGCC 480
CAGTCACCCC TGTGCCAAGT AAGGCCCTTC TACCTCTACA CCTAGCCCTT CCTCCCCTCT 540
AGCCCTGATT CTCAGAGGGG AAGGAGCAGG CAGGGTCGTG AGGATTCACT GGGCATATGG 600
GGGCTCTAAC 610