EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-02397

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:52454820-52456220

Target genes

Number: 13
Name	Ensembl ID

NRD1	ENSG00000078618
RN5S48	ENSG00000200839
RP11	ENSG00000229032
RAB3B	ENSG00000169213
KTI12	ENSG00000198841
TXNDC12	ENSG00000117862
ZFYVE9	ENSG00000157077
AL139156.1	ENSG00000241745
RP4	ENSG00000228407
CC2D1B	ENSG00000154222
PLA2G12AP1	ENSG00000224680
ORC1	ENSG00000085840
PRPF38A	ENSG00000134748

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:52455458-52455469	GCTTCCCGCCC	-	6.02
RREB1	MA0073.1	chr1:52454916-52454936	TGTGTGTGTGTGTTTTGAGG	-	6.29
ZNF263	MA0528.1	chr1:52456085-52456106	CCCCTCCCTCGCTCCTCCCCC	-	6.69

Enhancer Sequence

GTCTCCCACC CCTTTCCATC TGGATTCCAG GAAGCCGGGG GAAGAGGGCC CATCTTGTTT 60
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTT TTGAGGGCCC 120
ATCTTTCTCC CACCTCCTCC ACATCTCTCT TAGCTTCCAA AGGCTGCTGC CCTGCCCTCC 180
CCAAAGTTGC TTCCATGCTT GGACTACAGA ACAGAGTTGG ATGACTTTTT CTGTCCACGA 240
TTCTCTTATT TTCTGTGATC CCCGGTGCCC GTGTAACAAG GTCCAGTGCC TGGGTCCCCT 300
CCTTGGACTC CTGAGTGGCC GAGACACCGC TAGTGCGTGG ACACCACTCC AGCCCCCATT 360
ACCTTTCCAC CCTTACACCA CGACCCACAC CTGGCCTCCT CCCCAGGCTG ACCCAGCGCC 420
CCACCACCCT ATCTATACAC TCCAAGTTCT CCCACGATTC CTCCACTTGC AGCCGCCAGA 480
CCCTACTCTA TTCCAGAGCC TCCTCTCCAC TCCTGACCAG AATGTAGGCC CCTGTGTCCA 540
TTTCCAAGGC CACTTCCCTG TGTCTCCACC GGCTCCCTGC CCCCTTCCTC TGCAGCAGGG 600
TAGACCCAAC CTGGCCTCTC ACCCTTCCAT TCTCCCAAGC TTCCCGCCCC CAAGCCCCAC 660
CCCTCGTCTT CCATCTACAG TTACCCCCAC GCCGGTCCCC AGCCGGGCTC AACCTCCGAC 720
CCCAGCTATC CATACCCACA TCCCCCATAA ATGACCCTCT TTCGACCAGA CACTGCCCTG 780
CTGCCTTTCT CCTTCCCAGC TATCCATACC CACATCCCCA CCCCCGACCC TCTCCCAACC 840
AGACACTCCC CAGCTGCCCA GCGCCCCTTG CCCTCGGCAC CTCAGTCCCC TCCAGCTCCA 900
AACGACCCCC GCCCAGCCAG TCCCCTCCCC TCAGCTCCTC ACCTCCATGC CTCCCCCCGC 960
ACCCCCGCTC TAGCTCCCCT CAGTCCGCTC CCTTCACCGC CCCCTTCGCT GCCCCTCGGC 1020
TGCCCGGTAC CACCTTTCCG CACAGCCCCA CTCCGCCCTC CTCGCAGCTC CCCCGCCCCC 1080
CACGCCCCCG TTTCCCCCAG CGATCCCTCA CTGCCCTCCA GTTGCCCCCC ATCTCTCCTC 1140
CCAGCCCCAG CGCCGTCTTT CTTGCTCCCC TCCCGCCCTT GGAGCTCCCC CGGCTGCCCC 1200
CAACGTCTGG GAGACCCCCT CGGCGCCCCC TCCCTAGGTG AGCCCCACCT CTGCCGCCGC 1260
GGAGCCCCCT CCCTCGCTCC TCCCCCGGCT TCCTTCCGCT GCCCCGCGCT CCTTCTCGGC 1320
GCCCGCTCTC GGTGCCCAGC GCCCCGCGCC GGGGATCGGT CCCTGATCCT CCGCGGGCGG 1380
GCTGCCGGGG CCGCGCCCCT 1400