EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-01441

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:28811770-28813140

Target genes

Number: 17
Name	Ensembl ID

RP1	ENSG00000229820
U6atac	ENSG00000221216
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
RP11	ENSG00000229388
RNU11	ENSG00000209804
GMEB1	ENSG00000162419

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:28811882-28811897	GAGGTCAGGAGGTCA	+	7.19
RARA	MA0729.1	chr1:28811882-28811900	GAGGTCAGGAGGTCAAGA	+	6.22

Enhancer Sequence

AGTTCTAGAG ATCCACTGTA CAACATTGTG TTTATAGTTA ATACTGTAGA CTGGGCGCGG 60
TGGCTCACGC CTGTAATCCC AACACTTTGG GACACCGAGG CAGGCAGATC ACGAGGTCAG 120
GAGGTCAAGA CCAGCCTGGC CAACGTGATG AAACCCCATC TCTACTAAAA ATACAAAAAT 180
TAGCCGGGTG TTGTGGCAGG CACCTGTAAT CCCAGCTAGT CAGGAGGCTG AGGCAGGAGA 240
ATTGCTTGAA CCCGGGAGGC AGAGGTTTCA GTGAGCCGGG ATCCCGTGCC ACTGCACTCC 300
AGCCTGGGCA ACAGAGTGAG ACTCTGTCTC AATCAATCAG TCAATAGTTA ATACTGTATT 360
GGCCAGGTGT GGTGGCTCAT GCCTATAATC CCAATACTTT GGGAGGCCGA GGCAGGCGTA 420
TCACGAGGTC AGGAGTTCCA GACCAGCCTG ACCAACATGG TGAAACCCCA TCTCTACTAA 480
AAATACAAAA ATTAGCCGGG TGTGGTGGCG CATGCCTGTA ATCCCAGCTA CTCAGGAGGC 540
TGAGGCAGGA GAATCGCTTG AACCTGGGAG GCAGAGGTTG CAATGAGCCA AGATCACGCC 600
ACTGCACTCC AGCCTGGGCA ACAGAGTGAG ACTCTCCATC TCAAAAAAAA TAATAATAAT 660
ACTGTATTGT ACACTTAAAA GTCTGTTCAA AAGGTAGATC TCATAGTAAG TGTTATCACT 720
ATAAAATAAG ATTGAAATTT AAAAAAACAC ACACAATAAG AGACCACCAC GAGTACACTA 780
GGATGGCTAA AGTTATGCAA TTTAAAAGAC TGACAAGGCC GGGTGTGGTG GCTCACCCCT 840
GTAATCCCAG CACTTTGGGA GGCCGAGGCA GGCAGATCAC CTGAGGTTGG GAGTTCGAGA 900
CCAGCCTGAT CAACATGGAG AAACTTCATC TCTACTAAAA ATACAAAATT AGCTGGGCGT 960
GGTAGCACAT GCCTGTAATC CCAGCTACTT GGGAGGCTGA GGCAGGAGAA TCACTTGAAC 1020
CGGGGAGGCA GAGGTTACAG TGAGCCAAGA TCGGGCCACT GCACTCCAGC TTGGGCAACA 1080
GTGCAAAACT CTGTCTCAAA AAGAAAGGAA AGGAAATAAA TACAGGAGTG ATATGTTCAT 1140
TCTTGCAATT GTGATGATGA TTTCACAGGT GATATATGGC AAAAGTGGCC AAATTGTACA 1200
TGTTAAGTAT GTACACAGTT GTACATATTT ACAGTATTAT TGTGTCAGTT ATATCGTATT 1260
AAAGCTGGTT TGTTTTTTGT TTTTTGTTTT TTGTTTTTCC GAAGAACATT TAAAAAGGAA 1320
GGCCCAGGCC AGGCATGGTG GCTCATGCCT GTAATCCCAA CACTTTGGGA 1370