EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS075-00092

Organism

Homo sapiens

Tissue/cell

GM19240

Coordinate

chr1:150537740-150537970

Target genes

Number: 7
Name	Ensembl ID

PLEKHO1	ENSG00000023902
RP11	ENSG00000250661
ANP32E	ENSG00000143401
APH1A	ENSG00000117362
MRPS21	ENSG00000187145
ADAMTSL4	ENSG00000143382
MCL1	ENSG00000143384

dbSUPER

Number of super-enhancer constituents: 40
ID	Coordinate	Tissue/cell

SE_00755	chr1:150531631-150544092	Adipose_Nuclei
SE_01735	chr1:150537832-150541914	Aorta
SE_04228	chr1:150531582-150537864	Brain_Anterior_Caudate
SE_10265	chr1:150532493-150542117	CD19_Primary
SE_11160	chr1:150532177-150553440	CD20
SE_11968	chr1:150532742-150538471	CD3
SE_15431	chr1:150532555-150538028	CD4_Memory_Primary_8pool
SE_16925	chr1:150537142-150537842	CD4p_CD225int_CD127p_Tmem
SE_17377	chr1:150532162-150553370	CD4p_CD25-_CD45RAp_Naive
SE_17879	chr1:150532111-150553231	CD4p_CD25-_CD45ROp_Memory
SE_18425	chr1:150532151-150553362	CD4p_CD25-_Il17-_PMAstim_Th
SE_19272	chr1:150532377-150537851	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20081	chr1:150532355-150543156	CD56
SE_21978	chr1:150533050-150538064	CD8_Naive_8pool
SE_22540	chr1:150532459-150546461	CD8_primiary
SE_26032	chr1:150531381-150542256	Duodenum_Smooth_Muscle
SE_29795	chr1:150531574-150537828	Fetal_Muscle
SE_31016	chr1:150532631-150537783	Fetal_Thymus
SE_32586	chr1:150533309-150543254	GM12878
SE_33943	chr1:150532643-150537789	HCC1954
SE_36042	chr1:150537126-150537850	HMEC
SE_37389	chr1:150531646-150544455	HSMMtube
SE_40964	chr1:150530832-150543289	Left_Ventricle
SE_42411	chr1:150530284-150543186	Lung
SE_43688	chr1:150532235-150541859	MM1S
SE_46030	chr1:150532378-150543410	Osteoblasts
SE_50200	chr1:150531037-150543263	Sigmoid_Colon
SE_51405	chr1:150530419-150544422	Skeletal_Muscle
SE_53505	chr1:150530243-150543121	Spleen
SE_54986	chr1:150530454-150538131	Stomach_Smooth_Muscle
SE_58716	chr1:150532377-150553189	Ly1
SE_58896	chr1:150532323-150553188	Ly3
SE_59735	chr1:150532367-150553203	Ly4
SE_60541	chr1:150532429-150553188	DHL6
SE_61243	chr1:150532496-150553036	HBL1
SE_61580	chr1:150532299-150553306	Toledo
SE_62270	chr1:150532150-150553368	Tonsil
SE_64390	chr1:150532650-150537849	NHEK
SE_67307	chr1:150532235-150541859	MM1S
SE_68344	chr1:150532799-150553352	TC32

Enhancer Sequence

GTGTGATCTC GGCTCACTGC AACCTCCGCC TCCCGGGTTC AAGCAATTCT ACTCACTCAG 60
CCTCCCAAGT AGCTGGGACT ACAGGCATGT GTCACCACGC CTGGCTAATG TTGTATTTTT 120
AATAGAGACA GGGTTTCACC ATGTTGGTCA GGGTGGTCTC GAACTCCTGA CCTCAAGTGA 180
TCCACTCGCC TCGGCCTCCC GAAGTGTTGG CATTACAGGC ACCACGCCTG 230