EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS074-01407

Organism

Homo sapiens

Tissue/cell

GM19239

Coordinate

chr1:234535820-234536920

Target genes

Number: 3
Name	Ensembl ID

RP5	ENSG00000235605
C1orf31	ENSG00000168275
TARBP1	ENSG00000059588

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:234536699-234536720	AAATAGAAAGTGAAAATGACT	-	6.93
ZNF263	MA0528.1	chr1:234535940-234535961	GGATGAGGGAGGGCAGGAGGG	+	7.45

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I234400

chr1

234536187

234537833

Enhancer Sequence

AGAGATACAG TTCCTATGAA CAATTAAGCC CCATTATTTT ATTTACACAT ACACCTTTAA 60
TTCATTTCAT GACTGGAGAA TAAATCATAA AACATATGAG AGTGAGGTGG TCAAAGGTAA 120
GGATGAGGGA GGGCAGGAGG GAGGCAAAGG ACTTACTCCT GTTGGAAGAC TGAATAGAAA 180
AAGGTTGACT TAACACTAGA GTGACTAGAG GAGTCCTGCA GAAAGATGCC GGACAAAGCA 240
TTCTGGGCGC TAAAGAACAC AGAGCAGAGC ATATTAAAAT CTTTGAAAAA TCCTAAATGA 300
TATTTGCAGT GAAGCAGCAG AAAATACACA TTAGTGTTCT AGGATGCATA TCTTGCAATA 360
TATAGATCTA TACTTTTTTA CAGATCAGTT TATCAATAAT CTTAGTAATC CACCAAAAAA 420
ATTGCTTATG CACAGCAGCT TAAGTTACCA ATAACTTATA AGTTCTTCAG AGGAAAAGCC 480
CTAGGTCAGT GATTTAAATT CAAGGGCAGC ACATTATAAT TACAGTTGAA AAAGGGAGAA 540
GGTATCATAA TTTATGCAAT GTCTAATGAT TTACATATTG AATTAATTTA CATGTTAATC 600
ATAATAAGCA TGTTTATGGT TCTTAAAATT ATATAAGCAC ATTTTGTTAC AGTCAGTGAG 660
GTGATGTATC ATCTCCTATA CAATTCTCAT TACCCAGAAC CTAAAAATTG CCATTAACAA 720
AAAAGTATAT CTTTTTGTTC TTTCATTAAC AATGGGCTTC AGTACAATGA AATCTCACCT 780
GCACAAATGT TCTCACTCAT TTCCTTTTAA TGTCAGAACA GATTTCTGTT TAGAGTTAAA 840
TATTCCCTTC CATTGTTTAC AAGCCAGACA CTGCCTGAGA AATAGAAAGT GAAAATGACT 900
AGCCAATTTT CACTGCTTAA GAGTGAAATG AAAGCAAGTC ATCTGCATAA AGTGACAAAG 960
TTAAACTTAG AACTTTAAAA TGTTAAGGTG ATGTTTGTAA GCAAGAAAAA AACTTTACCC 1020
TAATCACAAC CCTTCAACAA AAGCAGAAAG GAAGCATCAG GATTAAAGAT ACAATAGAGA 1080
ATTTACAAAT GATATTCTCT 1100