Tag | Content |
---|
EnhancerAtlas ID | HS074-01186 |
Organism | Homo sapiens |
Tissue/cell | GM19239 |
Coordinate | chr1:198897980-198900120 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr1:198898344-198898359 | GAAGGGCAAAGGTCA | + | 6.27 | NR2C2 | MA0504.1 | chr1:198898344-198898359 | GAAGGGCAAAGGTCA | + | 6.48 | Nr2f6 | MA0677.1 | chr1:198898345-198898359 | AAGGGCAAAGGTCA | + | 6.89 | Rxra | MA0512.2 | chr1:198898345-198898359 | AAGGGCAAAGGTCA | + | 6.38 |
|
| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_08655 | chr1:198897914-198900439 | Brain_Inferior_Temporal_Lobe | SE_25328 | chr1:198890517-198909380 | DND41 | SE_49888 | chr1:198892247-198898923 | RPMI-8402 | SE_49888 | chr1:198899114-198909232 | RPMI-8402 | SE_61464 | chr1:198871577-198909555 | Toledo | SE_63050 | chr1:198888066-198907526 | Tonsil | SE_66241 | chr1:198898041-198898888 | Jurkat | SE_66241 | chr1:198899339-198900247 | Jurkat | SE_68041 | chr1:198833979-198907890 | TC32 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | AATAATTATA TAAAGTTTTC TATGTCCCCC TCAAAGTAAA GTAGCTTAAA TAGAAATCAC 60 TATTTTAGAT ATATTCTTAC AAGAATTCTT TCTAACAACA AATGTAGTAA TCTGGTTTAA 120 ATGTAAGTTG CACTTGAATA GCCTTATATC TTGAAGAAGA GCAATATGCA CTATTTATTA 180 ATTATAAAAG GAAACGAATC TAAGTTTACT GAGTTTTTAA AGTTTTTAAT AAAAATGTGA 240 GCATCATAGC TACTGGATTA TTTGCTATGT TCAACACACT CCGTTCACAA TTAAAGTTTG 300 CACATAGTGT CTAATAATGG TCAAGCACTT GCAAAAATGT TGCACCTGGA ACAGGGAGGA 360 GTGAGAAGGG CAAAGGTCAA AACCAGTCCT TAATAAGCAT TGACTAAATA GACTTTGGAC 420 TCAGTGAAAA GTCCAGACGA CCCCTGCAGC GTCATCTTAC AGCTCTGATT TTCCTCTTTT 480 CAACATGTAG TATAATCCAT AAATACAACC AAATCACTAG CAGCTTAGTC TTTGGTTTGG 540 TTTTCATCTT TCAGTTTCCC CCCACTGCCC CCTTCAAAAA GATTTGAAAA ATTAACCCCT 600 TTCTGTCCTC AGACTAACCA AATAATGAAT TTCTTCATAG TCACTGTTGT CAGCTTAAAT 660 CGTTAACTCT TTTCAGGGCA AGAGGCACTT TGTAAAGTGG CTCATAATAA CCAGAGTAGT 720 GACTGAGTGT TTCATTTTCT CCCAATATAT TTTGAATAGA TAACTAATAG TAACAAGCCA 780 ATCAAACAAT TATACAAATC AGTGAATTAT GTCTCTTTTA TAAATGTTTT TAAAGCAATA 840 GAATTAAATT AATACTTAAA ACCTTGCAAG GAATTTTTAC TTCTGTTTTC CCATCACACA 900 GTGGTTGTAT TTTCATGAGT TTCTTGATAA TTCATAGGTA TAATAAAAAT GTCTATAACC 960 AATTTTTGAC ATACTCTTCT AATTTCAAAT TATTTGATAC AGTTTACACC CTGATATTCT 1020 TATTGGCATA GTCTCCTCTT TTCATACTTG TCTTTTATTT TTCTAGTCCA ACATTTGCTG 1080 AAGGAGAAGT TAGTTCCTTT AAGTTAAAAC AGTAATTTCC CTACAGGAAA TATACCGAAT 1140 CAAGTATAAA CCACAAGAAT GAGTCGAGCA TCTACTTCAA GTGCATTAGT TGAGAGAAGC 1200 CTTCCACTCT GAAGTGGGAA CACTTCATGA ACCAGAAGTG AGAGCTGCCC AATCAAATTC 1260 AGTGTAATCG TATTATTCTG TCTACTACAC TGCAGATTTT CAGAATGCCA AAGACATCTG 1320 CGTCGGTCCC TACATTTATC CTTTTGATGT CATGTCTACC CTGTTAACCC TGTTTCCCTT 1380 AGAGTTAAAA ATATAACATT TTAAAACAAA AATTTAAGAA GACAGCTCTG CGTGTGAAAC 1440 ATAAAGAGCA CCATTGAGGG TGAGGCAAAG TCCTAACTAA GCAGAAATGA CTGGGAATGT 1500 AGCAAACTGG GTGGAAGTTC AGGAAGTGTG CTATAGTCTG AAGGAGGATC CTTTAGAAGG 1560 AGCATGAAAA CAGATAGAAG TAGTGTCCCT GGAGAGTTAA AAGAGGCCTG GGTTTCTCAA 1620 GGATTGCTGT TCCTAACTGA TTGTCGCAGT CTTAGAGAAC AGGAAAGAGG ATACAGCAAG 1680 GGGCAGACAT TTTGCACGAT TGCAAAGCTT CCCTAACTGG CCCTATTTTT TTATGCTCTG 1740 TTCGCCTACA GAATCAGGAT ACATGGAAAC AGAGCAGTAA ATCTCAACCA TGACCCAACA 1800 CAAATAAAAG TACCAAAACT TATTTCAAAG ATAAGTAGAA AGTGTTTCTT ATTTTATGTA 1860 ATATTTTTGA TTATCTACAA TCTTGCAGGA TCAAGACCAA TTTTTCCAGA GTAACAAGGA 1920 AAAGGAGAAA AATGGGAGTA GCTCAGAGTT CTATTCCTTA TTTAAAACTA TCTGTCCAGA 1980 ACATCTTAGC TTCAACCATC TGAAATTATA ACACCGATGT AATTTTACTG TTTTTTCCCC 2040 CAAGATTCTA TTATCCATTA CCTCCCACCA ACAAAGTTAG ATTCAGCACT ATTAAAATGT 2100 ATAGTTTTAA AAGTAAAGCA AAACTAGAAA TTTGTATAAT 2140
|