EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS074-01118

Organism

Homo sapiens

Tissue/cell

GM19239

Coordinate

chr1:182556920-182558300

Target genes

Number: 5
Name	Ensembl ID

RNASEL	ENSG00000135828
RGS16	ENSG00000143333
RP11	ENSG00000261504
DHX9	ENSG00000135829
HMGN1P4	ENSG00000224040

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:182558037-182558058	TTTCAATTTCACTTTCTCTGT	+	6.62
IRF1	MA0050.2	chr1:182558031-182558052	TCCTGCTTTCAATTTCACTTT	+	7

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_16180	chr1:182557172-182559046	CD4_Naive_Primary_7pool
SE_30080	chr1:182557396-182558774	Fetal_Muscle

Enhancer Sequence

TTTGTACAAC CCTGTGCCCC TATTTAAAGT ACAGACAATA TCTGACTTAT GTTTTTTGAC 60
TTTGATTTAT GATTTTTTGA CTTTGCAGTG GTGGAAAAGC AATAAACATT CAGTAGAAAC 120
CACACTTCAA GTACACATAC AACCATTCTG TTTTTTATTT CAGCATAGCA TTCGATAAAT 180
ACATGAGACA TTTAACACTT TATTATAAAA TAAGCTTTGA GCTAGATGAT TTTGCCCAAC 240
TGTAGCCTAA TGTAAGTGTT CTGAGCACAT TTAAGGTAAG CTAGGATAAG CTATGACGTT 300
CAGTAGATTA GGTGTATTAA ATGTGCTTTT GACCTACAAT ATTTTCAATT TAGGATGGGT 360
TTATCTGTAT GTAACCCCAT CATAAGTCAA GGAGTATCTG CAGTAGTGAA AAGAGCTTGT 420
ACTCTGACCT TAGGGAGATC TAAGTTTGAG CTTGTGGCTG TGTAATTTTT TACTATTACT 480
TCCTGTAACC TTGGATTGTT GAATCTCAAT TTTCTATTTC CTGAAATGGA GACAAAAATA 540
AATACAGTCA TGTGTGTAAA GTACATTAAA GTATGGAGTG TTGCAAATAT TAGCCACTCA 600
ATGAATGTTA GAGCTAATTA TATCCCGTTA TGAAAAAATA AATTGCTTAG TGAATTCTAT 660
TCTCCCTACA CATGTGCATA TAGCTACTAC ACGAATAGGC AACTGGCAGC TATCAATTTC 720
GTCCAACTGT CAATCAGATC TGAGAATTAC AGATCCAGTT CAATCATCAG ACAGCCCGAA 780
ACTGTTACCT GAATATTTAA ATAACTGCAT CTGCTATAGA ATTCACGAAG CAACCCTTTT 840
TCAGCAATCT CACCACTCTG ACAGTTTCAA AGCCTCAGAG GTTAATTGAT TAGCCTCTTA 900
GAAGTTTAAT TAATTGTGCA ACACATACAC GATCACCAGG CAATGAAATC TTTGAACCAA 960
AGTGTTTGTG TAGACCGTCC CCATTACAAT CAGATGTGAG GTGGGCTGGT ATAAACAAAG 1020
GAGCCGGGAA GGAGAGGAAA TATCAAGGAA GCCCTGAGTG ACGCATCAGA GTAGAGAAGA 1080
GACGAGCCTG CGGAAGTACT CCAACAGACA ATCCTGCTTT CAATTTCACT TTCTCTGTGC 1140
GACCTGAGTA AGTCGCAAAG AGATGCCTGA GAAACTGAGG ACATGGATAA ATGACGTGTG 1200
GACTCTGACA GAACTCTGGA AGGGCACTGG AGGAAGATCC TTCCGGGCAG CCAAGGGCTG 1260
GGAGCTCCCC TCCCACTTCC CAAGTCCTCC AGCCCCTGGC CTCTCCAGTC TCCAAAGCCC 1320
AAGAATTCTT CAGGATCGAC TTATCGAGGT TTTCTAGCTT TCCTCCTTCT GCCTGCCTTA 1380