| Tag | Content |
|---|
EnhancerAtlas ID | HS074-00507 |
Organism | Homo sapiens |
Tissue/cell | GM19239 |
Coordinate | chr1:54742290-54744100 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:54743272-54743293 | GTGATGAAAATGAAAGTAAGT | - | 6.53 | | NR2C2 | MA0504.1 | chr1:54743389-54743404 | TGACCCCTGCCCTCT | - | 6.43 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_01019 | chr1:54742220-54743317 | Adrenal_Gland | | SE_01019 | chr1:54743357-54745653 | Adrenal_Gland | | SE_01595 | chr1:54735208-54747683 | Aorta | | SE_03451 | chr1:54742376-54744111 | Brain_Angular_Gyrus | | SE_04901 | chr1:54742151-54747662 | Brain_Cingulate_Gyrus | | SE_05919 | chr1:54734892-54749698 | Brain_Hippocampus_Middle | | SE_07802 | chr1:54742248-54747743 | Brain_Inferior_Temporal_Lobe | | SE_08904 | chr1:54742651-54742878 | Brain_Mid_Frontal_Lobe | | SE_24580 | chr1:54742299-54743037 | Colon_Crypt_2 | | SE_24580 | chr1:54743350-54744906 | Colon_Crypt_2 | | SE_25961 | chr1:54737420-54746794 | Duodenum_Smooth_Muscle | | SE_26701 | chr1:54737688-54747569 | Esophagus | | SE_28122 | chr1:54742303-54745062 | Fetal_Intestine | | SE_29698 | chr1:54742317-54744189 | Fetal_Muscle | | SE_31383 | chr1:54733777-54747551 | Gastric | | SE_41585 | chr1:54742296-54743306 | LNCaP | | SE_41585 | chr1:54743339-54746155 | LNCaP | | SE_42582 | chr1:54737622-54745972 | Lung | | SE_46626 | chr1:54742299-54743302 | Ovary | | SE_46626 | chr1:54743369-54746342 | Ovary | | SE_47967 | chr1:54742267-54743053 | Pancreas | | SE_47967 | chr1:54743288-54743925 | Pancreas | | SE_50141 | chr1:54737715-54747690 | Sigmoid_Colon | | SE_52383 | chr1:54737623-54747577 | Small_Intestine | | SE_54182 | chr1:54736914-54745759 | Spleen | | SE_54942 | chr1:54737059-54745949 | Stomach_Smooth_Muscle | | SE_65414 | chr1:54736995-54742916 | Pancreatic_islets | | SE_65414 | chr1:54743507-54745020 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 4 | Chromosome | Start | End |
| chr1 | 54743012 | 54743800 | | chr1 | 54742342 | 54742516 | | chr1 | 54742604 | 54742755 | | chr1 | 54742820 | 54744081 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I054271 | chr1 | 54736922 | 54747506 |
|
Enhancer Sequence | AAAAAAAAAA AAAAAAGGTG TCAGCTACTT TCTGAGCATT GGCCACAGTG CTCAAGTCCC 60
CGTCTCCACG AAGCCACTGG AACAACTGCA GAGTAACTGT TGTGGAACAC AGATCTGGCC 120
AAGACATTAT CCAGCCCAGA GTGCTGCCCT GGCTTCCCAC TGCCCACTGG ATCAAGCCCA 180
TACTCAACAA GGTCCTTCAA CAATTGCCCG GCAACCTCTC CAGCCTCATC TCCCGCTGAG 240
CACCTGTCAA CCACCTCATT CTAGACACCA TCTCAGCCAG GGCTGCACTG CCTCCAGGAA 300
TGCCCTCCTG ATTTCTCAGC TTGGCAGACA GGCCTCTCCT GTGTCCTGCC ACAGGGGATG 360
GGTTACCTGT CAGTCTCTCT GCTAGGCTGG CTGCTCCTGT GGGCAGACTA TGGTTGATTC 420
AGTTCGAGCC TGGAACCAAG CCCCATGCCT TGCATATCAG AGACGGTCAA TGACAGTCAT 480
AACCACAGTC CTTTCTCCTT CTGTGACTTC ATCTCCCCAT CTATAAATGA GAAGCTTGGA 540
CTACATCAGG GATGGCAAAG AGGATATGTA CCACCACCGA CACATTCACG TTCATGGTAG 600
ACATTGCCAG TCACTATCTG TTGAGCCTGG ACACACAGCT TCAGAATCAT TCTCACGGTG 660
TTCTCAGCAG CCACCACACA TCAAGCAGAG CTGGCATTTG AATGGGGACT TCTTTGCTAC 720
TTCTTTAGAT AAGAGTTATG GTTTCTCTAT CTCCTTTCGG TCTCTCCCTC CTTTTATCTA 780
ATTCTCTACT CTCCCTGCTT CCGCCATCCA ATCAGATGTG CATCCACATT TGGACTTTGG 840
AGTGTTTGTG GAAGAGCACC CCATGAGGAA CCAGGAAAGC TGGGTTTAGA CTCTGATTAC 900
AGCCCCTGGT TAACTTGGGG CAAGTCATTC ACCTTTCTGA GTCTCACTTT CCCAATCTGC 960
ATGCCTTCTC TGCAGAAACA CTGTGATGAA AATGAAAGTA AGTTGCATGT TTAAAAACAC 1020
TATGTAACTG AAAACAACTA TTGGAATTTA AAAACAAAAC AAGAAGAAAA ACAGCCTGTA 1080
CCCAATGCTC AGTTCTCTAT GACCCCTGCC CTCTTGTGAG TCCCGTTTTG GACTTAGAAA 1140
TCCTTACTGG ACAGTGCCCT CCTTAGGACC ACCTTAGGGC CAAGGAACTT AGAAATTCTT 1200
ACTGGACAGT GTCCCCCTTA AGGGGGAACT AGGGAACCCA CCCAGATCAG TGAGGCTGGC 1260
CAAAGCCAAG CTGGGTTTGC CAGATGTGCA GCCCAACCGA GCTAAGCTGC GTGGAAAAAA 1320
AAAATGCCAC TGCTTGATTA TGTAAAATCC ATCTGGATCC AAAGCAGAAA ATCAAAGTTG 1380
GAAGGGCCCT CAGAGACCAC CTGGTCCAGC CTGCTCCATC TACTGGTGAG AAAACTAGGG 1440
TCCAGAGATG GGGAGCAACT TGCCCAAGGT CACTCAGCAA GTATGCGGCC AAGTCCTCTC 1500
TGTCCTTCCC TGCTGCAAAA CACCAGAACA CCACTCCTGA ACTCCCAAGC TGGCTTCCTG 1560
TTAGGCCCTC CCTGATCAGA ATGTTGGATC TAGTGCTTTG GGGCTGCCTG GGCTCCTGTT 1620
CTGTAATGTG AGCAATACAA ATAAACTCAG TTCAAACATT TACTAGGTCC TTAGTATATG 1680
CCAGGTGCTG GGGATGCCAA TATTAGGGCT TTTTTTTTTT TTAAAGGTGA GGTGTGGTCA 1740
GGTCAGTTTC CAAGCCATCT CCCTGCCAGC CCTTAACTTG CTACCAGAGA CATCTCATGC 1800
CACGGGACCA 1810
|
