EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS074-00328

Organism

Homo sapiens

Tissue/cell

GM19239

Coordinate

chr1:35971340-35972210

Target genes

Number: 6
Name	Ensembl ID

NCDN	ENSG00000020129
KIAA0319L	ENSG00000142687
TFAP2E	ENSG00000116819
RP4	ENSG00000239636
PSMB2	ENSG00000126067
EIF2C1	ENSG00000092847

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN(var.2)	MA0489.1	chr1:35971580-35971594	AGAGAGTGAGTCAT	+	6.21
JUN(var.2)	MA0489.1	chr1:35971585-35971599	GTGAGTCATTCCTT	-	6.28
Sox6	MA0515.1	chr1:35971996-35972006	AAAACAATGG	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I035505

chr1

35970932

35974826

Enhancer Sequence

TGCTGCATGA TCACTGGCAA ACTGTTTAAC CTCTCTGGGC CTCAGTTTTC TCACCAGGTA 60
AACAGGGCTA ATAATGCCTA CTTGGAAATA TTGCTATGAA AATTAAACAA AATGATACAG 120
TGCAACAATT AGTACACAGA GCGCTTGGCA TGTCATAGCC CACTCTGGCT TCAACTTGAT 180
AGAGACAACT AGGACAAAAC AAATACAAAA ATAAGTCACA GCAATCAAGG AAGACTGAGC 240
AGAGAGTGAG TCATTCCTTT TAATCATTTC CCCAAGGAGA TCAACAATGA AGAAACATAA 300
TAAGCAGAAT AAACTCTACT GGTGGTATCT CCCTTGGCAT ATACAGCTTG GTGAGAATTC 360
ACTCCAGAGA CCTCTTGGCT AATGGCCACA TCCTGCTCCA CAGCCCAGCA GGTCAGATCT 420
TAATCTGTAG TACCAAGCAT GGTTAATTCT GACTGGAATA GAAACTACCT CATAAAGAAT 480
GTGTTTACAG GCGAGAGATG GAGGAGAACT TGACTGTAAC CACATCAATC AACTGTTTTG 540
CAATTTGGCA GAAAATACTG CAGAATGGTT GGTGAATACT AACAGCCATA CAACTGTACT 600
TACCTGTAGC CAAGAACCAG CTTAGACTAG ATAATGAGCA GCTTTCTGCA TTTACCAAAA 660
CAATGGTCAG ACCTACATAG CATGAACATC TCTAGGGTCA AATTACCCTT TGTACATCTG 720
GGCAGCACCA AAGAAGCTGA CACCAAGCAG CTTTATATAT ACACTCCTCA GCCTATGAGC 780
ACTGCCCGCA AGCATCAGCT TCATTGCTCA TATATACCAA ATGTAAGAGC AGATTTAACC 840
ATTTCTCTGC TCCTTATTCA TAGCATGCTT 870