| Tag | Content |
|---|
EnhancerAtlas ID | HS073-11899 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr5:172308160-172310010 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr5:172308254-172308275 | AAAGAAAAAAAAAAAGTGAAA | - | 6.06 | | IRF1 | MA0050.2 | chr5:172308260-172308281 | AAAAAAAAAGTGAAACTGTCT | - | 7.15 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_00144 | chr5:172308594-172315447 | Adipose_Nuclei | | SE_00858 | chr5:172308173-172310098 | Adrenal_Gland | | SE_01538 | chr5:172308164-172310127 | Aorta | | SE_02239 | chr5:172308128-172310204 | Astrocytes | | SE_09730 | chr5:172307816-172310947 | CD14 | | SE_11321 | chr5:172308072-172311122 | CD20 | | SE_13632 | chr5:172308788-172309484 | CD34_Primary_RO01536 | | SE_26519 | chr5:172308545-172309661 | Esophagus | | SE_31376 | chr5:172308436-172310069 | Gastric | | SE_36923 | chr5:172308154-172310115 | HSMMtube | | SE_37969 | chr5:172304364-172310207 | HUVEC | | SE_40651 | chr5:172308588-172310213 | Left_Ventricle | | SE_44755 | chr5:172308290-172309251 | NHLF | | SE_51106 | chr5:172308576-172309680 | Skeletal_Muscle | | SE_51899 | chr5:172308558-172309771 | Skeletal_Muscle_Myoblast | | SE_52338 | chr5:172308262-172310072 | Small_Intestine | | SE_53284 | chr5:172308131-172309853 | Spleen | | SE_55707 | chr5:172308129-172310627 | u87 | | SE_63682 | chr5:172308544-172309832 | HSMM | | SE_67495 | chr5:172308129-172310627 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I172877 | chr5 | 172304534 | 172311002 |
|
Enhancer Sequence | AATGGCTTGA ACCTCGGAGG CGGAGGTTGC GATGAGCTGA GATCACGCCA TTGCACTCCA 60
GCCTGGAAAA CAAGAGCGAA ACTCCATCTC AAAAAAAGAA AAAAAAAAAG TGAAACTGTC 120
TAAGTATCCA CAAAAGTAGA GAAAACGGTA CAGGGACCAC GGTGTACTCA CCGCCCAGCT 180
TCACCACTGC CCATCTTATC TTAGTCTCAT GTTTAAGGCT ATCCAGTGGG CCTTATGCTT 240
GTGCAGATCC ATTCATGGAC TCAGTTCCCC AAGGGCCTAG ACTGGGTAGC GAGGAGGGCA 300
GTAGAGGAAA GGTCTGGGAC CTGCCCTTGA GAACTCATAC TCCAGTGGCC GGGGAGGGCT 360
AGGAGGGAGT GTTTCTTAAA TAATAAATAT TTATTATAAT CCGTCCTTTA GCTTTCTGTG 420
TTTGAGGCTA AGCAGTCCAA ATCTTTAACT TTTCTTCCAA ATATTTTCCA CCCAAATGGG 480
CCTGATTTGT CCCCACACTG TGGGGGAAAA GCAACAGGAC CATAAATTAG ATCTGGATTC 540
AGATCTCTGC CGTGGCACTT CATAGGTGTG TGAGCCTAGC CAAGTCTCCA GCCTCTCTGA 600
GCCTCATCTG TAAAATGGAA CAATAATCCC TAATTTGCAA GTCAGTCAAG ACAATTAGAT 660
GTGAACATGC TGGTCGAAGG CCTCTGTGGC CCTAGTATAT AGCAGGTTTG CTGTAAGCAC 720
CCCTTTCCCT CCTCCATTCT CTTCACCCTT TCCTCCACAT TCTCTTGACG GAGAGCTGGT 780
CACAACTGGT CACATCACCG CAGCAAGGGA CTGACTAATG TCAGCCAGGG AGGACGGCTC 840
ACTTCCTGGT CTGTCACATG CCTGGGGTTC TCACCAGCCT CCTGATAACC CATTTTCTTA 900
GTGACATTCA TGCTGACTCA CTTGGCTTGT GGTCAGTTCT GAAACTAGGG TCTTTTTGAG 960
CTCTCCCTTT ACCCCACCAC TGCTGCCCAG CGTGGCTCTG TGGCGTGGGA ATGGAGTCAG 1020
TATTACAGTA CGTAGTGTTG AGGTGGCCAC TCCCAAGGAG CCAGAAGCTT TGCTAGATTG 1080
GCAGCTTCAT GGGGTGGTGT CTGCCTTGAT CACTTTCATT TCCCCACTGT CTAGAACACT 1140
GCCTGGTATA TTAGGTGCTT AGCAAATGGC TGTTGAATGA ATTAATGAAT TTTGAACTGG 1200
TCCCTGTCTT CCAGGTGACT CTCATCTGCT CTGGGGCAGC ATCCTTGGAA AAGCAGATGA 1260
GCAAAACCAT GAGACCTTCA TCTGATTTAC CAAAAAATGA GCTCTAAACT GGTGATTCCC 1320
AGAGTACGGG CAGTGGAAGG ACCATGCCCT GTGGACTCAG ACTTGGGTTT GAATCCTAGC 1380
TCTGCCACTC ACTGGCTTGG TGACTCTGAG CTTCCATTTT CTCCCTGGAA AAATGAGATA 1440
TCAGTATTTT CCAGGGTTTT GTGAGAAATA CATGCAAATA TGTATGTCAA AGTGCCCAGC 1500
ATAGAATGGA AGTGATTATG GTTAAGCATC ATTTACTCTT TCCTTTGATT GCCTTCTGTA 1560
GCTTTGGTCC AAATCTCACC TCCCTCTTAG AGCGTCATCA TCGCCCAGCC TGCCTCCCTA 1620
CCCCTGTCCC CATGCCCAGC AAAGACTTAC TCTGCCTGAC ACCCAGGAGT CAGGGTTAAA 1680
CCAGCACCTA AAATTCAGCA CCTCAAATTC AGGTGCCTAC AAGGACCAGC CATATGTGAA 1740
GACAACAGGC TAAGTGGGGT GGTGGTGATG ATGATGATGA TGATTACTAT TAGAGATGGT 1800
GGTCTCACTC TTTTGCTCAG GCTGGAGTAC AGTGGAGTCG TCATAGCTCA 1850
|
