EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-10836

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr3:197574890-197575720

Target genes

Number: 7
Name	Ensembl ID

BDH1	ENSG00000161267
AC024560.3	ENSG00000214135
KIAA0226	ENSG00000145016
LRCH3	ENSG00000186001
AC055764.1	ENSG00000234136
AC144530.1	ENSG00000234742
RPL35A	ENSG00000182899

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr3:197575478-197575494	TTTTGTTTACTTAATA	-	7.43
FOXP2	MA0593.1	chr3:197575479-197575490	TTTGTTTACTT	-	6.62
IRF1	MA0050.2	chr3:197575164-197575185	AAGATGAAAGTGAAAGTGCTG	-	7.6
Lhx3	MA0135.1	chr3:197575461-197575474	TAATTAATTATTT	+	6.71

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I197846

chr3

197573754

197575990

Enhancer Sequence

AAGTGAGTCG TTTGAATGAT GCTGTTCAAG CTGCTGACTG GCTAAGTGCT TATTTGTTTG 60
GTCAGGCCCG TTGGTTTTTA TTGTCCATTA AAATGTCGAC CATTTTTCTC TCTGTAAGGA 120
ATCTTGACTA AATAGAGTGT CTCTTTTACT TGTGTCTATC TGCATGAGGA CAGAACAAGT 180
GATTATCTTG TTAACGGTAA ATCTGTCATT GGACATGTCA CTTTACTATC CAGCTGCCAT 240
TTCCTCAATT TCTAGTGTCA TAGTAAAGAT CAGTAAGATG AAAGTGAAAG TGCTGTGTGA 300
ACCATAAAAG GCCCGTGCAG ATGCAAACTG TTACTCAGAC CTCTCTCCAG CTTCCTCGCT 360
TTTGTAAATA ACAAAAGTTT GCTAGCCTCA CAGGCTTAAT CCTTTGCAGG AACTTTGATT 420
TGTTCCTTTC TGCTCTCCAC ACACATCCAA TTAACAACGC CATTAATATT TCTTAACGTT 480
TTGCAGCCTC TATAGTAGTG CCTGAAATGT TGTCATTTTA TTTTACCTGT ATTGCTTATC 540
TTTTTGTTCT GAAATCGTCA TTTTTTCTTC ATAATTAATT ATTTGTAATT TTGTTTACTT 600
AATATCTGTC TCTCATTTAT CTGTAAACTC CATGAAGGTA AGAACCATGT CTGTTTTACT 660
TACTGCTGTG TCCCTAGACC TTAGCAGGTC TTAGCTCATA GTAATGGTCA ATAAGTATTT 720
GTTGAATGAT TAAATGAATT TTTCTTGTCC ACTAAAGACT TTCCTGTATT TCATACTTTA 780
ACTAGAGACC ATCTCCTTTA AGTACGATGC GTATGTCTGT TTTACTGTTT 830