EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-10265

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr3:48646060-48646590

Target genes

Number: 21
Name	Ensembl ID

CDC25A	ENSG00000164045
ZNF589	ENSG00000164048
MRPS18AP1	ENSG00000229759
NME6	ENSG00000172113
PLXNB1	ENSG00000164050
CCDC72	ENSG00000232112
CCDC51	ENSG00000164051
RP11	ENSG00000244380
ATRIP	ENSG00000164053
TREX1	ENSG00000213689
SHISA5	ENSG00000164054
PFKFB4	ENSG00000114268
COL7A1	ENSG00000114270
UQCRC1	ENSG00000010256
SLC26A6	ENSG00000225697
CELSR3	ENSG00000008300
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
IMPDH2	ENSG00000178035

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1	MA0002.2	chr3:48646491-48646502	AAACCACAAAC	-	6.02
SRF	MA0083.3	chr3:48646317-48646333	TTCCCTTATATGGGCT	+	6.46
SRF	MA0083.3	chr3:48646317-48646333	TTCCCTTATATGGGCT	-	7.1

Enhancer Sequence

ATTTCTTGGG AATCTTCTCA CCTATTCATA TATCTATCTG TGACTCAAGA TTTCTTGTGT 60
CAATTTAGAG AATTTGTATT TTTTGGAAAA TCACACATTT CATTGTACTG TTAAAATGCA 120
TTTGCTTCCT AAAATGTATT TCTGGTCTAG CCTGGAGATT ATGACCTTGG GCAGTGAGGC 180
TGACAGACCT GGACCCCTGC AAGTCACCTA AGGTGTCTGA ATCCCATTTT CCGCATTATA 240
AGAGGAGACA TGATCACTTC CCTTATATGG GCTCCTTAAC AAAAGGCTGG AAAAGAATTT 300
GGCCGCCTAC TTAACGGGCA TTATATGCTA AATAATGTTG GCTTATAGTG AAGATTGTCC 360
CGTGAAGCCA AGGCGTGGCT AGGGTAGGGA ATGGGGCCAT TCTCGGGGTG AGTGGTCCTG 420
GGTCCGAACC CAAACCACAA ACGGGAAGAC TCGAGCCCAA GGTCACACCC CAACCAGGGA 480
AAAGACGGCA GGCCCAACCT GGAGGCCCTC TCCCCAAAAG CGTCCCCAAC 530