Tag | Content |
---|
EnhancerAtlas ID | HS073-09272 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr20:49099860-49101090 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr20:49099945-49099957 | AAACAAACAAAC | - | 6.32 | Foxd3 | MA0041.1 | chr20:49099949-49099961 | AAACAAACAAAC | - | 6.32 | IRF1 | MA0050.2 | chr20:49100403-49100424 | AGTTACTTTCGTTTTCTGATT | + | 6.45 | PLAG1 | MA0163.1 | chr20:49100010-49100024 | GGGGCCCTCAGGGG | + | 6.37 | ZNF263 | MA0528.1 | chr20:49100331-49100352 | GAAGGAGGGGAAAGGAAGAAA | + | 6.19 | ZNF263 | MA0528.1 | chr20:49100553-49100574 | CTTTTCTCCTTGTCCTCCTCT | - | 6.46 | ZNF263 | MA0528.1 | chr20:49100328-49100349 | GGAGAAGGAGGGGAAAGGAAG | + | 6.93 | ZNF263 | MA0528.1 | chr20:49100586-49100607 | TCTCCCTCTCCCTCCTCCCCA | - | 7.6 | ZNF263 | MA0528.1 | chr20:49100583-49100604 | TTCTCTCCCTCTCCCTCCTCC | - | 8.92 |
|
| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_09702 | chr20:49099267-49101914 | CD14 | SE_35076 | chr20:49099510-49101033 | HeLa | SE_36261 | chr20:49099608-49101497 | HMEC | SE_38028 | chr20:49099487-49101373 | HUVEC | SE_42215 | chr20:49099650-49101307 | Lung | SE_45848 | chr20:49099274-49101772 | Osteoblasts | SE_56239 | chr20:49099333-49101535 | u87 | SE_58900 | chr20:49099242-49199363 | Ly3 | SE_64529 | chr20:49099800-49101242 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I050481 | chr20 | 49098099 | 49101669 |
|
Enhancer Sequence | TTGAACCCGG GAGGCAGAGG TTGTAGTGAG CCAAGATCAT GCCACTGCAC TCCAGTCTGG 60 GCAACAGGGC AAGACTCTGT CTCAAAAACA AACAAACAAA CAAAAAAAAG AGCTAGTTAC 120 CTTTATGGGC AACTGGGGCA CAGTCCCAGA GGGGCCCTCA GGGGATGATG TGGAGTATAC 180 CGCAAGATTG TCTCAGGAAG GGTTGGGGAA ACTGTGCTGT TTATCCGCAA TGACCACTCT 240 CAGCGGTTGA AGGTGGTGCC CGGGGCCAGC AACTCCAGTA CACTTCCCTT CCCACACATG 300 TGACCTGCCA TGCGCACATG AAGCACACAG GCTCTGGGCA GAGAGATGCG GGTGCCGGAG 360 GTTGGGTATA CGTCACCAGC ATTTATAGAA CTGTCCATCT AGCTTCAGGC AGCTCTCTTG 420 AGTGGGCTGA GGAGGATGAG TGAGCACTGA TGCTGGCCAG GAAACTTAGG AGAAGGAGGG 480 GAAAGGAAGA AAGGAACAAA ACTAACATTT ATAAAGTGCA GGGTAGTTGC CAGCCATTAG 540 CACAGTTACT TTCGTTTTCT GATTCCCATT GTACAGTTGA GAAAAACGAG CTCAGAGAGG 600 GAAAGTGACT TGCTCTTGAC TATGTGACAG TTAAGTGCTG GAATTCCAGC TCAGATTGAG 660 TCTACAAAGA CAGTGTTCTC TATCTCCCTC TTCCTTTTCT CCTTGTCCTC CTCTTCTCTG 720 CTTTTCTCTC CCTCTCCCTC CTCCCCACCA CCTTGTTTAT TTTTTTTCCA AATAATATTT 780 AGAGTTACCA AGACAGAAGT CAAGAGGAAA GCTTTCTGGT GTCCTTAAAG ATGTGCTTTA 840 TGAAAGATAG TTTTCATTTG CTCTTTTATT CATTTGACAC ATTTATTAAG CACCTATGAT 900 ACGCAATATA TAGAAAACAA GACAGACACA ATCCTTGCCC CTTAGGCTTT ATACTCTAGC 960 AGGAAAAGGA GGCATTAAAC AGCTAAATAC ACATGGCGAG GAGGGGGTAA GGGAAGCCTA 1020 GATGGGGAAG TGGGGGAGTG AGATGGGAAC AGGAAGGCAG CCATAAAAAG CAATTAGTTG 1080 ATTACGTTGT GATACAGGTT TCTCAACCTC CGCATTAGTG AAATTTTGAC TGGATCATTC 1140 CTGTAGGCTG TTCTGGGCAT TGTAGGATAT TTAGCAGCGT CTCTGGCCTC TACCCACTAG 1200 ATGCCAGTAG CATTCTTACC CTGGTTTTGA 1230
|