Tag | Content |
---|
EnhancerAtlas ID | HS073-09268 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr20:48762770-48764240 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2F1 | MA0017.2 | chr20:48763324-48763337 | CAGAGGTCACAGG | + | 6.19 |
|
| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_00281 | chr20:48759254-48771376 | Adipose_Nuclei | SE_01213 | chr20:48762314-48764201 | Adrenal_Gland | SE_04367 | chr20:48762614-48764403 | Brain_Anterior_Caudate | SE_06103 | chr20:48761906-48767335 | Brain_Hippocampus_Middle | SE_08474 | chr20:48762175-48764260 | Brain_Inferior_Temporal_Lobe | SE_09939 | chr20:48756442-48771323 | CD14 | SE_26035 | chr20:48762701-48764405 | Duodenum_Smooth_Muscle | SE_26637 | chr20:48762240-48768225 | Esophagus | SE_31752 | chr20:48762429-48765495 | Gastric | SE_36247 | chr20:48759700-48765480 | HMEC | SE_38394 | chr20:48762031-48771312 | HUVEC | SE_40548 | chr20:48762754-48764324 | K562 | SE_42604 | chr20:48762266-48768236 | Lung | SE_47237 | chr20:48762188-48765389 | Panc1 | SE_48123 | chr20:48762285-48771272 | Psoas_Muscle | SE_50639 | chr20:48762487-48765419 | Sigmoid_Colon | SE_51470 | chr20:48762498-48764705 | Skeletal_Muscle | SE_52952 | chr20:48762693-48764430 | Small_Intestine | SE_64376 | chr20:48759301-48765527 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 48763365 | 48763680 | chr20 | 48763985 | 48764114 | chr20 | 48763277 | 48763795 |
|
Enhancer Sequence | TTCCTGCAGA TCTCACCCTG GAAACCTCCA TCTCCAGGAA GCCATCCATG ATGCCTCCTC 60 TGACCCCACA CTCCCCCCAC ACGAGGCCCA TTGCTCATGC CTGTGGCCTT GTCTACGTTT 120 GTCTTTCCCT ACCTAAATGT GAAGTCGGGA GGCCCAGAAC CATGTCTGGC TCACTCACCA 180 GGGCCCTGAC ACTCAGTAAA TGCTTGCAGA ATGAGCAAAT TCCCAACCAC AATCCTAACG 240 GACAACTCCA TGGCTTTGTC TCTGGGTGCC GCTCACCGAC ATACCTTGGG AAGGAAGTAC 300 TGGGTTCCCC ATTTGTCATG ATAGGGAAAC TGAGGCTCAG GGAGAGAGAA GGCCTTCTCC 360 AGGTCACACA ACAGCAAGCT GCTCCTGACC TACCCTGACC CAGAACCAGG ACAGCTGCCC 420 TCCCCTGCCC CTTGAAAAGA CCAAGGCTCA GAAGGGGAAC GGAACACACC AGGGTTACAT 480 GCCCTTGGCT CCTTTTGTGC AGAAGAAGAC CGTGAAGCCC AGGAAGGAGA AGGACCTCAA 540 CAGAGGTCAC ATAGCAGAGG TCACAGGGGC CTAGATCTCC TGGTTCCCCA ATTCTCAGGC 600 GAGGGCTGTT TCTCTTGAGC CACGCAGCAC CCCCACTGCC CCAGCAGCCG CCCCAGCCTG 660 GGGATCACCA TGATCAGGCC CAGCAAGGCC TTCCCCTTTC TGATTCTTGT TTGTAGCCAA 720 GGCCCAGGGC TCAGAAGCAG AAAACCCCGA GTGGGTGGGG TGGGAGGACA CGGAGAGGCG 780 GTGAGAAGGA AAGAACAAGT GAACCTTCCC GATCGACCTG CCTGCCTGCC CCACAGCATG 840 CAGGGACAGG AAGTGGGCAG AGCCAACTGC AACATGATCA AATAACAGTT ACCCTAACAA 900 TGGCTGACAC ACACTGAAGC CTGTCATGCG CTGGGGTGTG GCCCATATCG GAGAGGTTGC 960 AAACTGACTC CCTCTGACAT GTTTTGCCCT CAGTTTTAAA AAGTGAGCTA AATTTGAAAA 1020 TCACGTAAAA TTCCTAGTTT CCTGCTTCCC TCAACAACAC AGGGCTCTGG CCACCCTAGG 1080 CCTAAACAAT AAGTAATAGC TGCCCCCATC CAATGGGATA TGAGCTCCAG GTTCACCCTG 1140 GTCCTCTCCC TTCCCTGGGG TCTCACACTG GGTGGCCAGA TTTGGTGGCA GCCCTGGCTG 1200 GGCCCCTGCA GTCATCTGAG TTTTTGAGTC TGAGGCACAG TCTCTCATTC AAGTATCAGC 1260 CCGTCAAGGA AGGAACTGAG TGATCTCATT TCCTAGACAA GGAAACTGAG GTTCAGAGCT 1320 GGGTTTGGAT CCCAGACACA TCAATGAGAC ATGTTAGCCT GGACGTTCGG GGCAGTCCTG 1380 AAACCAAAGA TGATCCAGCT CTCTCCCCAC GCCATGGAGA ACGTCCTCCA AATCTGAATA 1440 TTTTTCCATC TAAACTCCAT CTCTCTTTGG 1470
|