| Tag | Content |
|---|
EnhancerAtlas ID | HS073-07980 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr19:56620490-56621250 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr19:56620816-56620829 | AGAGACAGCTGCA | - | 6.36 | | Zfx | MA0146.2 | chr19:56621022-56621036 | GAGGCCGAGGCGGG | - | 6.01 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_01218 | chr19:56618854-56620626 | Adrenal_Gland | | SE_23430 | chr19:56616631-56621015 | Colon_Crypt_1 | | SE_23834 | chr19:56620531-56620944 | Colon_Crypt_2 | | SE_24810 | chr19:56616383-56620937 | Colon_Crypt_3 | | SE_30536 | chr19:56619664-56621055 | Fetal_Muscle | | SE_31642 | chr19:56616387-56621077 | Gastric | | SE_41593 | chr19:56616504-56621043 | LNCaP | | SE_42583 | chr19:56616608-56621126 | Lung | | SE_47517 | chr19:56620505-56620895 | Pancreas | | SE_50656 | chr19:56619275-56621050 | Sigmoid_Colon | | SE_53594 | chr19:56617792-56621131 | Spleen | | SE_53594 | chr19:56621157-56625020 | Spleen | | SE_69016 | chr19:56619063-56620956 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056104 | chr19 | 56616033 | 56626686 |
|
Enhancer Sequence | TTTTTCTTAT GTTCATTTTC CTAATATTTT AATAACAGGT AATTACGTCT GTATTAAGGG 60
AAAAAGCCTA AAGGGGTGTC TTGGACAGCG GCTGGGGCTA CGTATCGGAA CTGGTAGATG 120
GCTGGGTGCT GGGGGCCAGC AGTGAAGGCG ACGGCACAGA ACAGGCCACC CCAGTGCAGC 180
CCCAAAGGCA CGGGGGCAGC AGCAGATGCG AGAAGGGTGC TCTAGCCTCC CCTTTCTTCC 240
TGCAAGCAGA TGAAACCCCA CGTGAAACAC GCCCTCCTCG TAGAGGAAGA GGACGTGCTC 300
ATCACCAGCA CCGGGAGCTG AGGCTGAGAG ACAGCTGCAC ACACCAACCC TTATCTCCCT 360
CAGCCTCCCC AAGGATTTTA GTTACTTTTT CACAGTTGCT ATTCTTGGGC ATAGAAGCCC 420
TCAGGTCTAA CTGCTTCAGG AGGCCTTCAC TTTCTGAAGT CTCCCATGTA CCTGTAAAAA 480
TAACATTTGT GGCCGTGCGC AGCGGCTCAC ACCTGTAATC CCAGCACACT GGGAGGCCGA 540
GGCGGGTGGA TCACGAGATC GAGACCATCC TGGCTAACAC AGTGAAACCC CATCTCTACT 600
AAAAATACAA AAATTAGCCG GGAGTGGTGG CGGGCGCCTG TAGTCCCAGC TACTCGGGAG 660
GCTGAGGCAG GAGAATGGCG TGAACCCGGG AGGCGGAGCT TGCAGTGAGC CGAGATCACG 720
CCACTGCACT CCAGCCTGGG CGACAAAGTG AGACTCCGTC 760
|
