Tag | Content |
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EnhancerAtlas ID | HS073-07671 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr19:39183940-39184960 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:39184056-39184074 | GGAAGGCAGGAAGAAAAG | + | 6.98 | EWSR1-FLI1 | MA0149.1 | chr19:39184712-39184730 | ACATCCTTCCTTCCTCCC | - | 7.11 | Foxd3 | MA0041.1 | chr19:39184184-39184196 | GAATGTTTGTTT | + | 7.22 | RUNX1 | MA0002.2 | chr19:39184668-39184679 | CTCTGTGGTTT | + | 6.14 |
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| Number of super-enhancer constituents: 63 | ID | Coordinate | Tissue/cell |
SE_00117 | chr19:39182049-39186979 | Adipose_Nuclei | SE_00865 | chr19:39182076-39185083 | Adrenal_Gland | SE_01543 | chr19:39181993-39190228 | Aorta | SE_02408 | chr19:39181342-39185560 | Astrocytes | SE_03166 | chr19:39182673-39184911 | Brain_Angular_Gyrus | SE_03903 | chr19:39182386-39185093 | Brain_Anterior_Caudate | SE_04868 | chr19:39182350-39185068 | Brain_Cingulate_Gyrus | SE_05805 | chr19:39182078-39206004 | Brain_Hippocampus_Middle | SE_06803 | chr19:39182428-39185106 | Brain_Hippocampus_Middle_150 | SE_07777 | chr19:39182077-39185225 | Brain_Inferior_Temporal_Lobe | SE_08790 | chr19:39183752-39184145 | Brain_Mid_Frontal_Lobe | SE_08790 | chr19:39184171-39184496 | Brain_Mid_Frontal_Lobe | SE_08790 | chr19:39184503-39184741 | Brain_Mid_Frontal_Lobe | SE_09404 | chr19:39182333-39191485 | CD14 | SE_13194 | chr19:39183611-39184401 | CD34_Primary_RO01480 | SE_13490 | chr19:39182874-39185111 | CD34_Primary_RO01536 | SE_14624 | chr19:39183423-39184854 | CD4_Memory_Primary_7pool | SE_19537 | chr19:39182491-39185050 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20249 | chr19:39181278-39188425 | CD56 | SE_20865 | chr19:39183372-39185109 | CD8_Memory_7pool | SE_22709 | chr19:39182642-39186831 | CD8_primiary | SE_23062 | chr19:39182731-39184965 | Colon_Crypt_1 | SE_23732 | chr19:39183074-39184903 | Colon_Crypt_2 | SE_24739 | chr19:39183955-39185064 | Colon_Crypt_3 | SE_25779 | chr19:39180965-39189795 | Duodenum_Smooth_Muscle | SE_26525 | chr19:39180697-39193852 | Esophagus | SE_27614 | chr19:39180632-39201469 | Fetal_Intestine | SE_28533 | chr19:39164445-39201888 | Fetal_Intestine_Large | SE_29583 | chr19:39181947-39185064 | Fetal_Muscle | SE_31384 | chr19:39182626-39185071 | Gastric | SE_34299 | chr19:39180509-39186508 | HCT-116 | SE_34681 | chr19:39184216-39184943 | HeLa | SE_35430 | chr19:39183365-39184979 | HepG2 | SE_35812 | chr19:39168616-39191950 | HMEC | SE_36926 | chr19:39172838-39186932 | HSMMtube | SE_38012 | chr19:39181151-39186650 | HUVEC | SE_38896 | chr19:39182466-39184917 | IMR90 | SE_40594 | chr19:39180727-39193965 | Left_Ventricle | SE_42097 | chr19:39180674-39193834 | Lung | SE_44161 | chr19:39181143-39185634 | NHDF-Ad | SE_44797 | chr19:39181919-39184905 | NHLF | SE_45660 | chr19:39180876-39186673 | Osteoblasts | SE_46686 | chr19:39184055-39184894 | Ovary | SE_47114 | chr19:39164477-39226374 | Panc1 | SE_47461 | chr19:39182677-39185005 | Pancreas | SE_48075 | chr19:39180646-39186770 | Psoas_Muscle | SE_48555 | chr19:39182415-39185026 | Right_Atrium | SE_49449 | chr19:39182454-39184953 | Right_Ventricle | SE_50056 | chr19:39182445-39193963 | Sigmoid_Colon | SE_51136 | chr19:39181521-39186773 | Skeletal_Muscle | SE_51705 | chr19:39182066-39185548 | Skeletal_Muscle_Myoblast | SE_52339 | chr19:39180899-39193971 | Small_Intestine | SE_53291 | chr19:39181227-39190272 | Spleen | SE_54534 | chr19:39180651-39189737 | Stomach_Smooth_Muscle | SE_56725 | chr19:39182441-39185071 | VACO_400 | SE_57359 | chr19:39183289-39184322 | VACO_503 | SE_57359 | chr19:39184333-39185048 | VACO_503 | SE_58038 | chr19:39182547-39184962 | VACO_9m | SE_62811 | chr19:39125155-39186863 | Tonsil | SE_63494 | chr19:39182024-39185548 | HSMM | SE_64225 | chr19:39182411-39185099 | NHEK | SE_65266 | chr19:39181937-39187543 | Pancreatic_islets | SE_68725 | chr19:39182386-39185068 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I038673 | chr19 | 39164536 | 39206516 |
|
Enhancer Sequence | TCTAGGCCCA AAGCGACTTT GCAAGAGACT CCCTTTATTC TGGGCTTAGT GGAATTCCAG 60 CTTCCAACAG CCATTTCCCT CCACCCCCTT CAGTTCTGAG AACATGTTTT GTAACAGGAA 120 GGCAGGAAGA AAAGAGAAGG CGAGTTTGTT CAGCTGGGTC AGCCGCATCC CACCAAGGCC 180 CTTTCTTCCC TCCAGCTCAC CATCGCTCTG CCCACTGGAA CCACTCGGTT GCCCTGTGTC 240 TGCCGAATGT TTGTTTCTTA ATCAGCGCCC CAGAGTAGAG AGGGCTTTGC CTCTTCGGGT 300 TGAGGGAGGG AATCATTGAT GAATGGCTCA TTAAAGCCCA CTGCTGCCAC ATTCCTGGGT 360 GCTTAGGTCA CCTCCTGAAC AATATCCATC ATTCATTCAC CTACCGCCCC ACATCCTGGC 420 GGCTGGGAGG GGTCCCTGTG ACGCAGGAAG GACTTTATGA CCAGAGATGC TAGGTCTCCG 480 TCTCCCTCCT GCAGCCCACA GTGACAAAGC AGAAACTGCT CTTGGGGCCC CCTGAAGCCC 540 GCCTTAGCTG GGTCACCATG GGCCTTGGCA CACGGAGGGG TGACAGTGGA TCCCAACTCA 600 ACTGACAAGC TTGCCTTTCT CTGTTCTTCC ACCCCCCTTC CCCGCACTCA CACCCTGTGC 660 TATTTTAGCA ACCAGAGAAG CCTCTTTAAT AGGCTGCCCG TGTGCAGGGG CAAGCTCTGA 720 AGCCTCCTCT CTGTGGTTTG GTTCACATGT GTTCTCAAAG ACAGATGAGT CCACATCCTT 780 CCTTCCTCCC TAGATAGGTC AAGGGCTGGG TGCAGGCTGC CTTCACAGGA GGGCCAGGGA 840 CAGGCTGGGA GGAGCGGGGC CACCTTTTGC GAAGCGGGTG ATCTGCTGGG GCGTTGCTCT 900 GCCTGCCTGC CTTGTTCTCT GAGTTTACCT CTAGCTTGGG GACCAAGGGT GGGCTGGGGC 960 CTTCTTTTTT TTTTTTTGAA ACCGAGTCTT ACTCTGTCTC CCAGGCTGGA GTGCAGTGGC 1020
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