| Tag | Content |
|---|
EnhancerAtlas ID | HS073-07408 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr19:16448940-16450300 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RUNX3 | MA0684.1 | chr19:16449876-16449886 | AAACCGCAAA | + | 6.02 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_02121 | chr19:16448235-16450623 | Aorta | | SE_11761 | chr19:16448597-16450448 | CD20 | | SE_14486 | chr19:16448358-16450704 | CD4_Memory_Primary_7pool | | SE_15424 | chr19:16448830-16450328 | CD4_Memory_Primary_8pool | | SE_15819 | chr19:16449013-16450244 | CD4_Naive_Primary_7pool | | SE_16376 | chr19:16448709-16450527 | CD4_Naive_Primary_8pool | | SE_17319 | chr19:16448094-16450433 | CD4p_CD25-_CD45RAp_Naive | | SE_19662 | chr19:16448483-16450678 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20477 | chr19:16447136-16450765 | CD56 | | SE_20801 | chr19:16448268-16450591 | CD8_Memory_7pool | | SE_21459 | chr19:16448569-16450058 | CD8_Naive_7pool | | SE_22931 | chr19:16448097-16450690 | CD8_primiary | | SE_30197 | chr19:16449039-16450309 | Fetal_Muscle | | SE_31861 | chr19:16449060-16450155 | Gastric | | SE_37239 | chr19:16448480-16450955 | HSMMtube | | SE_38557 | chr19:16448117-16451385 | HUVEC | | SE_41301 | chr19:16448493-16450620 | Left_Ventricle | | SE_42601 | chr19:16448631-16450689 | Lung | | SE_45405 | chr19:16448360-16450644 | NHLF | | SE_49016 | chr19:16448672-16450633 | Right_Atrium | | SE_53383 | chr19:16448370-16450551 | Spleen | | SE_61491 | chr19:16432573-16510994 | Toledo | | SE_62295 | chr19:16434424-16512260 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I016337 | chr19 | 16448221 | 16451210 |
|
Enhancer Sequence | CTAGACTGGG CAGCAGCAGA GAGGGGTGCT GAATGACTCG GGGGACCTGG TTGACAAGGG 60
GTCAGGACCG TGAAGGGGAC AGTGGTTTTA CTCCCCTGTC ATAGTCACAG AGAGCAACAC 120
ACAAAATCCA AGGATTCCTG GGATGACAGA ATTTCTGACC TCAAGGCCAA GATGATGCTG 180
GGTAGAGTGT GCAGCGTGTA GTGTAGACGG GGACTTGGAT CCGCTGGCCC TGGCTGCCTG 240
GAGATGCTGG GTAGAGCACG TAGTATGCAG CGTAGACAGC ATTCAGAGTC CCTCAGCCCT 300
GGCTGCCCCT ACCTCTGCCC CTTGCCCCTG GCCATGGCCC TGGGCGCACG CCTGGCCCTC 360
TCTGAGCCAC AGCTCCCTCC CACCAGGGCT GGTGAGAAAA GTAAACCGAG AGTGCTGTTT 420
CCTGCCACCC TGCTGGGTGC TCAGCCTCCC TCCACCCGCA TCCTCTCGAG TGGGTAGAAT 480
CCCAACTGGG GGCCCTCTGG CAGGGTCCGG GAGCTGGCAC ACGAGCAGGC ACTCTGGCTC 540
GGCCATGCAT CCGTCCATGG GCCACTCGCC GAGACACGTG GCTCTAAATG GACACAGTCA 600
TTCAGGAAAT AGCGCCTCGC CCACCGAATG CCAGGCGCCA CTCAGCAGGC TGCTGTAACT 660
CCGCAGGCTG CCTCCTGAAT TGCCCTCCAC TTTCAACCTT GACCCCAGGT TGGCCTTTCT 720
GGGGACTGTC CCAAGATCGA GAGACACACT TCACAGCCAA GCCCTCGTCT GCAGCCTCGG 780
AGCTATGAGA TGTTCCAGCT CCAGGGAAAA AACTCAGGAA TCAGAAGTCT GGCCAGCCCC 840
ATCCCACTCC TCTTGGCTTT AATGTAACTC AGAGGCACCG ATCCTGGCTC TTGGGGCAGA 900
ATTCTCCACA TTCCTGGTGT GTTTCCGTTG AACCCCAAAC CGCAAACACA TCCTGACATC 960
TCATTTCCTC AATGTGCCCT GGTGGTGACT CGGGCCACCT TGCCGGGAGC TCGTTTTGAG 1020
TCATACAGAG ATTTGTCGAA GGAAGGGTTT CTCATCTCAG AAGTTGGAGG CCGTTCCCAC 1080
CAACCTCCCT CCCTGCATCT GTACAAGAAT TGCTGGCGGG GCTGCTATTC CCTGATGCTT 1140
GGATCTGAGC TCTCAGTGAC TCGGGAGGCA CTGGCCAGGG GCCCTGGACA AATCTAAGCT 1200
CAGTTCCTTA TGTCACCACT GTCAACCTCA GGCACGGGAA GGCGGCTCTC AGTCTCTTTC 1260
CTCCTCTGTA GAGCTGGGCT CTTAGCAGCT ATCTTGGCCG GGCTCTATCT CAAATGGATG 1320
GAATCTGGGC TATGCCTGAC ACATAGTAGG TGCTCAGTGA 1360
|
