EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS073-07340 
Organism
Homo sapiens 
Tissue/cell
GM19238 
Coordinate
chr19:13272410-13275640 
Target genes
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF13MA0657.1chr19:13273958-13273976GGGCCACGCCCCCTTTCC+6.7
KLF14MA0740.1chr19:13273959-13273973GGCCACGCCCCCTT+8.42
KLF16MA0741.1chr19:13273960-13273971GCCACGCCCCC+6.62
Klf12MA0742.1chr19:13273959-13273974GGCCACGCCCCCTTT+6.28
Nr2f6(var.2)MA0728.1chr19:13272421-13272436GAGGTCAGGAGTTCA+6.22
SP1MA0079.4chr19:13273957-13273972CGGGCCACGCCCCCT+6.01
SP3MA0746.2chr19:13273959-13273972GGCCACGCCCCCT+6.82
SP4MA0685.1chr19:13273957-13273974CGGGCCACGCCCCCTTT+6.68
SP8MA0747.1chr19:13273960-13273972GCCACGCCCCCT+6.92
Number of super-enhancer constituents: 81             
IDCoordinateTissue/cell
SE_00539chr19:13272838-13277005Adipose_Nuclei
SE_00809chr19:13274306-13274748Adipose_Tissue
SE_00965chr19:13273230-13276219Adrenal_Gland
SE_01884chr19:13273272-13276495Aorta
SE_02410chr19:13273115-13276563Astrocytes
SE_02943chr19:13273247-13276283Bladder
SE_04421chr19:13272986-13276406Brain_Anterior_Caudate
SE_06231chr19:13272976-13276921Brain_Hippocampus_Middle
SE_07309chr19:13273010-13276611Brain_Hippocampus_Middle_150
SE_08538chr19:13273131-13276518Brain_Inferior_Temporal_Lobe
SE_09569chr19:13272934-13276409CD14
SE_10284chr19:13272476-13276735CD19_Primary
SE_11152chr19:13260138-13284995CD20
SE_12008chr19:13272973-13276424CD3
SE_13260chr19:13275091-13275811CD34_Primary_RO01480
SE_13717chr19:13273092-13276618CD34_Primary_RO01536
SE_14456chr19:13272656-13276599CD4_Memory_Primary_7pool
SE_15461chr19:13272885-13275850CD4_Memory_Primary_8pool
SE_15914chr19:13272942-13274410CD4_Naive_Primary_7pool
SE_15914chr19:13274696-13276414CD4_Naive_Primary_7pool
SE_16444chr19:13272749-13276117CD4_Naive_Primary_8pool
SE_16902chr19:13272921-13276228CD4p_CD225int_CD127p_Tmem
SE_17360chr19:13270598-13276927CD4p_CD25-_CD45RAp_Naive
SE_17844chr19:13272515-13276870CD4p_CD25-_CD45ROp_Memory
SE_20072chr19:13272484-13276702CD56
SE_20795chr19:13272889-13276553CD8_Memory_7pool
SE_21526chr19:13272945-13274823CD8_Naive_7pool
SE_22040chr19:13272919-13276576CD8_Naive_8pool
SE_22453chr19:13272766-13276693CD8_primiary
SE_23096chr19:13272751-13276502Colon_Crypt_1
SE_23766chr19:13273074-13276318Colon_Crypt_2
SE_24716chr19:13273141-13276251Colon_Crypt_3
SE_25952chr19:13272861-13276782Duodenum_Smooth_Muscle
SE_26584chr19:13272607-13276846Esophagus
SE_27635chr19:13272489-13281569Fetal_Intestine
SE_28568chr19:13272401-13281569Fetal_Intestine_Large
SE_29636chr19:13272951-13276577Fetal_Muscle
SE_31149chr19:13273001-13276614Fetal_Thymus
SE_31408chr19:13272136-13277461Gastric
SE_32780chr19:13273287-13275484H1
SE_34050chr19:13272939-13277307HCC1954
SE_34500chr19:13272745-13281640HCT-116
SE_34633chr19:13271191-13281627HeLa
SE_36380chr19:13273191-13276536HMEC
SE_37565chr19:13273392-13276032HSMMtube
SE_38051chr19:13272931-13280418HUVEC
SE_39215chr19:13273157-13276721IMR90
SE_40104chr19:13273262-13276388K562
SE_40852chr19:13272994-13276753Left_Ventricle
SE_41693chr19:13273306-13276145LNCaP
SE_44417chr19:13273127-13276411NHDF-Ad
SE_44845chr19:13273133-13276636NHLF
SE_47439chr19:13272634-13281546Panc1
SE_47495chr19:13273233-13276204Pancreas
SE_48450chr19:13272917-13276448Psoas_Muscle
SE_48836chr19:13273028-13276636Right_Atrium
SE_49692chr19:13273916-13276150Right_Ventricle
SE_50086chr19:13272766-13277385Sigmoid_Colon
SE_51384chr19:13273052-13276750Skeletal_Muscle
SE_52361chr19:13271922-13281551Small_Intestine
SE_53312chr19:13272871-13276631Spleen
SE_54883chr19:13272938-13276492Stomach_Smooth_Muscle
SE_55159chr19:13273233-13276560Thymus
SE_56946chr19:13272949-13273675VACO_400
SE_56946chr19:13273886-13276505VACO_400
SE_57396chr19:13273150-13273659VACO_503
SE_57396chr19:13273697-13276492VACO_503
SE_57920chr19:13273914-13276402VACO_9m
SE_60135chr19:13260128-13279366Ly4
SE_62354chr19:13259874-13293454Tonsil
SE_64811chr19:13273192-13276593NHEK
SE_65341chr19:13272919-13276239Pancreatic_islets
SE_66624chr19:13273268-13273900Jurkat
SE_66624chr19:13274003-13274767Jurkat
SE_66624chr19:13275022-13276422Jurkat
SE_67827chr19:13273032-13276700u87
SE_68590chr19:13260276-13279271TC71
SE_68591chr19:13260276-13279271TC71
SE_68592chr19:13260276-13279271TC71
SE_68593chr19:13260276-13279271TC71
SE_68683chr19:13273233-13277405H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr191327458613275096
chr191327354013274187
Number: 1             
IDChromosomeStartEnd
GH19I013160chr191327120013285018
Enhancer Sequence
AGGAGGATCA CGAGGTCAGG AGTTCAAGAC CAACTTGGCC AATAAGGTGA AACCCCATCT 60
CTACTAAAAA TACAAAAATT AGCCAGGCAT GGTAACACGC GCCTGTAGTC CCAGCTACTC 120
CAGAGGCTGA GGCAGGAGAA TCGCTGGAAC CTTGGAGGAG AAGGTTTCAG TGAGCCGAGA 180
TGGCACCACT GCACTCCAGC TGGGCGACAG AGTAAGACTC TGTCTCAAGA AAAATAAAGA 240
GACCAGGCGC AGTGGCTCAC ACCTGTAATC CCAGCACTTT GGGAAGCCAA GGTGGGCGGA 300
TCACAAGTTC AGGAGCTCGA GACCAGCCTG GCCAATATGG TGAAACCTCA TCTCTACTAA 360
AAATACAAAA ATTAGCCGGG CGTGGTGGCA GGAGCCTGTA TCCCACCTCT TGGGAGGCTG 420
AGGCAGGAGA ATCGCTTGAA CCCGGGAGGC GGAGGTTGCA GTGAGCCAAG GTCAAGCCAC 480
TTCACTTTAG CCTGGGCGAC AGAGCAAGAC TTCATCTCAA AAAATAATAA TAAAATAAAT 540
TTTTGCGGGG CTGGGAGTGG TGGTTCATGC CTGTAATCCC AGCATTTTTG GAGGCTGAGG 600
TGGGCGGATC ACTTGAGGTC AGGAGTTTGA GACCAGCCTG GCCAACATAG TGAAACCCCA 660
TCTCTACTAA AAATACAAAA ATTAGCCAGG CGTGGTGGCG CGCACCTGTA GTTCCAGCTG 720
CTCGGAAGGG TGAGATGGGA GAATCGTTTG AACCCGGGGC CGGGGGGCTG AGGTTGCAGT 780
GAGCTGAGAT AGCGCCAATG CACTCCAGCC TGGGTGACAG TGAGACTCAG TCTCAAAAAA 840
AAAAAAATTT TTTTTTGTTA ATACTTATCA CAAGTGCAAT TTTACCTTTG TAGAATTAAA 900
CCGTTGTTTC TGAGTTAGTT TCCTCTTGTA GCCTACTGCC TCCAAGTCTA GCAGATGGTT 960
AAGCGGTTTT TGTGAATGAA TGATGCCTTT GCAACCTTCG TTTGAGATCT GTCCTCTTAA 1020
CGTCCACTGT GTATATATGA GGAAACAGGC CCACAGAGTT TCGCTCTGCA AGACAGCAAG 1080
TAAAGGACAG CTCTAGTCGG GTCCTCTATC CCGAAGCCTC CTCCCCACTC TGCCCTGCCC 1140
TGCCGTGCAG GACCCAAAGG AAGGGCGCCC CAGTTCAGCC TCTGTAGATC TGGGAAAGGG 1200
CCGGGCCACA GGTCGGGACC AATCCAGAAG CAGCACCCAG ACCGGTTTAC CCGGTTCCAG 1260
GACCTTGGGC GAAGTCCACC CGCCCGAGGG CAGGGACGAC GCAGGCCACG CCGCGGCCCA 1320
GTTGCTAGCC AGGCAGGGTG GGGATTTGAT CTTGCCAAGG AAATGTGAGC GGGAGGCCGA 1380
GCGTTGGAGG TGGGTAAGTC GTCACTATGC AGGGCGGAGC CATCCTGTGT CTATCACGCC 1440
CAAGGGCGGT GCATGCAAAT TGACTCCCGC ATTTGGCTTT TCCCCGGGCT CCGTCTCCGC 1500
GCGCTGCAAC CCGCGACTTC CAAGAACTCC CCGCGTAGTC AGCTGCCCGG GCCACGCCCC 1560
CTTTCCGGAC CCGCCCTGCC CGCCCCAGGG AGGCGGGGGC GGAGCTTGCG GCCCAGCGGG 1620
AAGGCGGAGG CGGGGGTCGC GCCCAGGTCC CGGGGGCGTC AGAGGCAATG GGAAGTCGTG 1680
GCTTCTGCAC CGCCCTTGGG GGTTCGGCTC CCAATCAGGG AAAAAGGGCC GAGAGAATGA 1740
AAGAGTAATG AGACTTGCGA GTTTGAGGCT CACACTACTC TCTTTGGGTT GGGGGTTGCT 1800
GAAGCCTCCA CGTGTATTCA GGGAGCCCCG AACCTCACAC CTCTGTCCAG GGGAGCTCAG 1860
AACCCGCCGT GTTCTGGAAA GCCTACACCT TCCCCGGTTT TTTAGTGTCT AGGGGAGCCC 1920
ACAACCCTCA CAGCCGTGTC TAGTAGCGCT CAGATCCACA CACCTGTGTT TGGGGGAGCC 1980
CAGATCTTCT CTACCTGTGT CCAGATGAGT TCAGAGCCCC GACGTTTGTC CAGGAAAGCC 2040
CACCTCTGTC CAGAAGCGCT CTGACCAGGA CCTTTCCTGT TTCCTGAGGC TCAGCCTAGG 2100
GGGTCATCCC ACCCAGGTCT GTGTTAAGGG GAGCTTGTGT CTCCCCAAAC ATGTCCAAGT 2160
GAGCTGAGCT CAGGAGCTGA GGCCTCCCCA TATCGTGCTC CCCGCCTGGC CCTTTGGTGA 2220
ATCCCTTTCT CAGAAGAAAC CCTCAGGGGC CCTAGCCCTG CTGCCCTTCC CTGCACTGTC 2280
TTCGAGCCTC CTGGCCCAAT TGGCCCCTCC CCCAGTACAC TGTTGAGTCT TAGTTAAGAC 2340
ATAATCCCAG CATTCACTGT CCCCCATCCC CCAGCTCTCC CGCACCTCGG CGGCTGGCCG 2400
GGCCCCCGGG AGTGCCGTCA TCCCAGCCGG CTGGCCACCC GACTGGCACC AATTAATTTC 2460
CTCCTCGGCC TGTCCACCCA GGGCCTCGGC CTGTCTGGTT GCCAGCTGCT CACCCTCAGC 2520
CAGCCCGCCC CCTCGGGCTC CCAGGGAATT GCCAACAGTT CTCCTCCTTC CTGCAACCCC 2580
CCCACCCCCA ATCCAGGCCA CCCCACCCAG CACAGTTAAT CAGAAAAAGC TGACAGTTAG 2640
GACCTGGAGG AGTGATCTGA AATCAGATGG AGGAGGGGTG GGATGTTAAA CTTTCGGACC 2700
CAGGGATGCT TGGGGTGGAG CGGGGGCATG GCTGGAGGGA GGCAGAGGAT CCAGTTTTAC 2760
TTAAGAACCC CAAATCAAAG GCTTGTAGCT TCCAGATGGG GACTGCAGGG AGGGCTGACC 2820
CCCTCCCGCA TACACCAGGC GGGCAAGGTG GAGCGCCCCT CCTCGGAAAT TGCCCCCCGC 2880
CCAAGATGCG TCAGTGACAG CTGTGCCTCC TCAGCCCGCA CCCAGCCGGT TTCCTTTTCC 2940
TGTGCACACT CTCCCGATGG GCTGGCCTTC AGCCTGGAGA GACTCCACGG CCCCTTGGAA 3000
GGGGCTCCCC AGAGGGTCTT CCTGGACGAG GGGGAGGGGA CAGGCTGAAG AACAATGGGG 3060
CTTCTGTGGC TGCAGGACGC CAGGCACTTC CTGTTAACCC TTTCCTCGGG GTGCAGCTGC 3120
AGGGAGCACC TCCCAGGTCC CGCCTTGTGG GAAGGGGCAG AGGCAGCCTG AGGGGAAATC 3180
TTGTTGCGGG AATTAACTGT TGTGTTAATT GAGGCTTTTG TGAGTGTACT 3230