EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-07181

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr19:6423100-6424460

Target genes

Number: 17
Name	Ensembl ID

ACSBG2	ENSG00000130377
CLPP	ENSG00000125656
ALKBH7	ENSG00000125652
PSPN	ENSG00000125650
GTF2F1	ENSG00000125651
KHSRP	ENSG00000088247
SLC25A41	ENSG00000181240
SLC25A23	ENSG00000125648
CRB3	ENSG00000130545
DENND1C	ENSG00000205744
TUBB4A	ENSG00000104833
TNFSF9	ENSG00000125657
CD70	ENSG00000125726
TNFSF14	ENSG00000125735
GPR108	ENSG00000125734
SH2D3A	ENSG00000125731
VAV1	ENSG00000141968

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr19:6424390-6424400	GCACGTGACC	-	6.02
Foxd3	MA0041.1	chr19:6423289-6423301	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:6423293-6423305	AAACAAACAAAC	-	6.32
PLAG1	MA0163.1	chr19:6424170-6424184	GGGGGCTAAGGGGG	+	6.95
USF2	MA0526.2	chr19:6424333-6424349	CGCCCACGTGACCCCG	-	6.47
ZIC3	MA0697.1	chr19:6424303-6424318	GCGCAGCGGGAGGGC	-	6.25

Enhancer Sequence

CTGACATGGT CAAACTCCAT CTCTACTAAA AATACAAAAA TTAGCTGGGT GTGGTGGTGC 60
ACACTTATAA TCCCAGCTAC TCGGGAGGCT GAGGCAGGAG GAGCACTTCA ACTGGAGAGG 120
TGGAGGCTGT GGTGTGCTGA GATCGTGCCA CTGCACCCCT GCCTGGGTGA TATTGAGACT 180
GTTTCCAAAA AACAAACAAA CAAACAAAAA ACCAAGACTC TATGGGACAC AAGTTACATC 240
TCAGACACGT GAAGAGCAAC TTTAAAGAAA CCTCAACCCA GCAAACTTAG GATCAGAGTC 300
TGGGGTTTAG AAACCCAAAC CATGTTAAGA ATCTCCCTTT CCACCAGTCT CCATTTTTCT 360
ACGCTGCCCT AGAGCCAAAA CTCATGGGAT GCCCACAGGG GGCCTGTCCC CACCAACTGA 420
CAGCACCAGC TTCCTCCCTT CAAGCTGTCC CAGAATCAGA CGGTTCCATG GGCAATAAGA 480
CCAAATGCAC GCTAGAACCC ACCCAACTCC AAGGGTGAGA GAGACGACAG AGGGCCAGAA 540
CACAGGCGTT CACTTAACGG GACCTCCCAC CTTGGGAGGA GCCAGTCTCT AGCCCCGGAG 600
GCATTGGGAC AGCCCAGGAG CCGGTCGGCG GCAAAGTCCT CCCATTCTAC CGACCCCCAC 660
CCCTCCAGGC CATGGGGAGG CTGCAAATGG AGCTGGAGAG GTCAGTCCTA GCAGCATGTG 720
ACACTTCCTT GTCATTACGC CTCAATACAC GGGGGTGGGA GACCCTCCCT TCTTTCCCCC 780
AAAGAGACAG ACCACGCTTT CAAGCCACCA AAGCATCCAA GAGCCAGTCC CCATGCTCGT 840
CTTCCCCATT TCGCCCAAGT GCTCAGCCCT AGACAGGTCC CCATCCACTT TCCCGACTGA 900
AGAGGAAGGA CTGTCCCTCC CACCCCCACA ATGTCCCTTT CTCCTAGAGA GGGGACAGAA 960
ATGGGACTGG GTTGGGGGCA AACACTGCCC TTTGCCCTGA TATGGAGGGG AGAGTAAAGG 1020
CCCTCCGCCC GGGAAGGTGG ACCCCTGCCT CCAGGCATGT CCTAAGGCCG GGGGGCTAAG 1080
GGGGGGGTCC CAAAAGTGCG TCTCCGAGCT CCGGGGCGCC TGCACACCCA GGCGCCGCTC 1140
CTGGTGACCC CCAGTGCGCC CCTACTCCCT GCAGGGGGGT CACCCGTTGG GATCCCACTC 1200
GAGGCGCAGC GGGAGGGCCA GGCCCCCGCC TACCGCCCAC GTGACCCCGC GACGGCCCCG 1260
GCCCCCCTCC GCGACCCTGC GCGCGCGCGC GCACGTGACC CCCGCCCCCT CCCCCGCCTG 1320
CGCGCGCGCG CGAGCGCGCC CCTCAGGCCC TCGGCCTCCT 1360