Tag | Content |
---|
EnhancerAtlas ID | HS073-07050 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr19:1455500-1456070 |
Target genes | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SP2 | MA0516.2 | chr19:1455763-1455780 | AGGTGGGTGGGGCCTAG | - | 6.09 | SP2 | MA0516.2 | chr19:1455885-1455902 | TAGGAGGCGGGGCTTAG | - | 7.01 |
|
| Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
SE_04580 | chr19:1455395-1456756 | Brain_Anterior_Caudate | SE_07653 | chr19:1448648-1457040 | Brain_Hippocampus_Middle_150 | SE_34483 | chr19:1454954-1456959 | HCT-116 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I001454 | chr19 | 1454661 | 1457763 |
|
Enhancer Sequence | TGCGGCGGTG GGCGGGGTGG CGCGGCGGTA GGCGGGGCCC TGCGCCAGTG GGCAAATCAG 60 AGTGCAGATA TTATGGGCGG GGTCTGGGGT AATGGGAGGA GTCTTATGCC TCCTGGGTTG 120 GGGGGCGCGG GTTCTGGTTC AGGAGGCGGG GCCAGAAGCT GGAGGTGTTG GTGGGTGGAG 180 TCAGGAGGCT CAGAGCCTGA GCACAAGGGC GGTGGGGTGC GACAGTGGAA GGTGGCATGG 240 CCTGTGGGCA GGGCCAGATC AGCAGGTGGG TGGGGCCTAG AAGGACGAGG TCTAGGTTCT 300 GGGTGGAGCC CAAATGGGAA GTGGGAGGAG TCAGAGCCTG GGATGGACTA AAGGCGGGGT 360 TTAGACAGTG GGTGGGGTCA TATCTTAGGA GGCGGGGCTT AGGGAGCTGG CAGGGCTGGA 420 TCAGGGAGAA GGCAGAGGTA GGGTCAGGGC CTGGGGCGGG GTTATCAGGA AGAGGCGGGG 480 TCAGAGCCCA GGGTGGGGTC ATCCCAGGGA GAGGCGGGGT CAGAGCCGGG GGCGGGGTCA 540 GCTCCAGCAC TTGCCCTCGT GTGGTCCTGA 570
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