| Tag | Content |
|---|
EnhancerAtlas ID | HS073-06234 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr17:37956590-37957960 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx3-2 | MA0122.3 | chr17:37957421-37957434 | TTTAAGTGTTTTA | - | 6.33 | | Sox6 | MA0515.1 | chr17:37957064-37957074 | AAAACAATGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_10214 | chr17:37956351-37958108 | CD19_Primary | | SE_10853 | chr17:37945953-37979523 | CD20 | | SE_11904 | chr17:37955936-37957595 | CD3 | | SE_14700 | chr17:37955741-37956938 | CD4_Memory_Primary_7pool | | SE_17008 | chr17:37956342-37957262 | CD4p_CD225int_CD127p_Tmem | | SE_17573 | chr17:37953922-37958012 | CD4p_CD25-_CD45RAp_Naive | | SE_17896 | chr17:37955478-37957907 | CD4p_CD25-_CD45ROp_Memory | | SE_18319 | chr17:37954826-37958329 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19193 | chr17:37955523-37957660 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_22122 | chr17:37956132-37957955 | CD8_Naive_8pool | | SE_22381 | chr17:37954891-37958043 | CD8_primiary | | SE_32555 | chr17:37956071-37958169 | GM12878 | | SE_43567 | chr17:37954951-37958466 | MM1S | | SE_58368 | chr17:37909481-37978016 | Ly1 | | SE_58889 | chr17:37909243-37979334 | Ly3 | | SE_60580 | chr17:37909490-37957939 | DHL6 | | SE_60998 | chr17:37907678-37978969 | HBL1 | | SE_62252 | chr17:37909189-37978818 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr17 | 37956642 | 37957933 | | chr17 | 37956720 | 37957590 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I039798 | chr17 | 37954999 | 37957986 |
|
Enhancer Sequence | TATTATTCTT TAATCTATAC ATGTAATTAT ACTTGCCTTT TTGTACATAT GATCTATTTT 60
ATAATAAAAA AAGTTAAAGG CTTCCTGAAT ACCTTTTTTA TAACTGAACT TGTGGAGAAA 120
AGAATATACC AAACCACAAA TTGCTGATAA AGGTAATTGC TATACATTCC CAGAGGCAGG 180
GAAAAGATGT CTAAATTGAA TCTAACCCAT AGGAAATTAG ATTAAACTAA ACTTTCTAAA 240
GGAGCTACTC TAGGGTACAA TTGCTCCCAT CTTTGTCTAT GTTTTCAGGC CTCTTAGGAA 300
GATGACACAC ACGAACACAC ACACACACCC CAGAGAGAAT TTTGTAGGCT GAAGAGAACA 360
AAGGTTTGGC TCACTGGGGC TGATGCACAT GGTTTCATTT CCTGGGGTGA TGGTTATCAC 420
ATGAAAGGCT TGTACTCCAG AGCAGACATT TTTGGTTTCA CCTGAGACAC TGCAAAAACA 480
ATGGGTCCTG GAAAGGATCC AACATCTAAA TCCTTCAGGG GCAATAGCAG TCTCAGCCAA 540
CTGTGCCTCA GTTTGTTTTT ACAGGCACAT AAAATGCTCA GTTGGAGAGA AGAACCTATC 600
AAAGATGGCA AACAGAATAG ACAACTTGGG TATCTTGGAG AGCATGTTGA TACTAGGAAT 660
TTCCCAGTGG AAAAAAGAGA TTCTGAATTT CCACCTTAAA CTATGAGATC TCAGAATCCA 720
ACTCTACGAA GGACAAAGTT GGAAGTAATA TCCTCAGGTC TGCCGGAGAT ATTGTGAGAA 780
GGGACAAAAC AAGATAGAGG CTGTTAGGGA AGGCACAAAA GGGTGATGTT ATTTAAGTGT 840
TTTACAAGGA TCGGGGGTCA TAACCATGAA ATCTTCAGCA AATGCAAAAG TCAACTGGAT 900
AACAAAGAAG CTTAATCATC TTAATGTGGC ATTTTAATGA TGCCACTGAT TTGCTATGCC 960
AATTCAGAGA TAATGAGGCC CTAATGCTAC AGATGTTCAG CCAGGCTAAA AGAAAGGGGG 1020
TGGGGGGGGG CTTTTCTAGC ACGCCATTTT CTAACTATCC AATTAAACAA ATTGTGAAAG 1080
CATCTAAATA GTTTACCAGG TTTTGACAGC TGTTAATAGG ATTTAGAAGC TTGAAGCACT 1140
AAAGAGCAAA ATGGGAAATA TATGTATTGT AGGTATTCAG TCTACAAAGT TTGTTACTGT 1200
CGCCCAATCT AGCACAAACA GATGAACTAG AACAGTTTTC CTTATAAAAT TAATGTCTAT 1260
ACTTCTCTCC CACAATGACC TCTTTGTATT AGGAAGAAGA ACACTGAAAC GATGGGTCAT 1320
TTTCATTTTC TAATTTACAT TTTTGCATGT AAAGTAATGA GAGAGAGAAA 1370
|
