Tag | Content |
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EnhancerAtlas ID | HS073-06043 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr17:28048180-28051960 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
DUX4 | MA0468.1 | chr17:28051134-28051145 | TAATTTAATCA | + | 6.62 | GATA2 | MA0036.3 | chr17:28050533-28050544 | GAAGATAAGAA | - | 6.02 | Nr2f6(var.2) | MA0728.1 | chr17:28049076-28049091 | GAGGTCAGGAGTTCA | + | 6.22 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_00091 | chr17:28045681-28051592 | Adipose_Nuclei | SE_04346 | chr17:28046933-28049197 | Brain_Anterior_Caudate | SE_04346 | chr17:28049764-28051340 | Brain_Anterior_Caudate | SE_05391 | chr17:28046933-28049249 | Brain_Cingulate_Gyrus | SE_05391 | chr17:28049551-28051445 | Brain_Cingulate_Gyrus | SE_07345 | chr17:28047026-28051309 | Brain_Hippocampus_Middle_150 | SE_08600 | chr17:28046767-28049189 | Brain_Inferior_Temporal_Lobe | SE_09243 | chr17:28042414-28052463 | CD14 | SE_10472 | chr17:28045694-28052232 | CD19_Primary | SE_10996 | chr17:28029408-28057228 | CD20 | SE_18775 | chr17:28047974-28051610 | CD4p_CD25-_Il17-_PMAstim_Th | SE_20563 | chr17:28047036-28052191 | CD56 | SE_23030 | chr17:28048087-28052234 | CD8_primiary | SE_30972 | chr17:28046914-28052405 | Fetal_Thymus | SE_41508 | chr17:28048268-28051414 | Left_Ventricle | SE_43139 | chr17:28048273-28049358 | Lung | SE_43139 | chr17:28049422-28051322 | Lung | SE_48078 | chr17:28048278-28051210 | Psoas_Muscle | SE_51084 | chr17:28048062-28051459 | Skeletal_Muscle | SE_54418 | chr17:28047421-28051997 | Spleen | SE_55620 | chr17:28048429-28049094 | Thymus | SE_55620 | chr17:28049223-28051345 | Thymus | SE_58538 | chr17:28008486-28106930 | Ly1 | SE_62296 | chr17:28008388-28106801 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 28049276 | 28051287 | chr17 | 28048295 | 28048345 | chr17 | 28049478 | 28050072 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I029718 | chr17 | 28045771 | 28052417 |
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Enhancer Sequence | AATAACAATA ATTCCAAACA TTTTAGTTAG GGTTTAGAAA AAGAGGAAAA TAACCTAATC 60 AAAATGATCC AAGAGTAAAT TTAACTTTCA TATGTGTTTT AAATGTATCA GAGAAAAGAA 120 GTTAAGATTC ATTATATATT TGCTCCAGCA TAGAACGGAC ATTGCAGTAT AATCCTACAC 180 TTGTTCCCTG GATTGCTTTT AGGTTTTGGT CGAGCTAGGT CCTATAATCT ACCCCAGTGG 240 CAACTCAGGA CCCAGGAAAA CAAGGGAAAA AGGAAAAACT TTTAACCACC GGCTTTACTA 300 CTAAAGGCAA AATTTCTCTG CAATGATTGG AAGGAAAGCT AGAATTCTGA GGGTCTTTTG 360 TTTTCTCACA CAGTAAGACA GCTAGAAAAG CTGTATGTAA ATCCTGCAGA CTTCCTAAGT 420 CATCAGGGGA CCCTAGACAC CACAGGTCCA ACCCTTCAAA TGTCTAAGTA TTGGGGATTA 480 CGGTTTCTGA AAGGAAGGTG GCTGAAGATA TTCAATAACA AACTTTCTAC CAAAACAAGG 540 AAACATGGTC CATTTTGTTC TTTTTGTCAA ACAAGAAAGG GAAAATGATG AGGAGGCATG 600 GATGTGTCCT TATTCACCAT TAAGAAGACA AAGGGTGAGA CATAACAGCT CTGAAAAGGG 660 AGACGACCAG TTACAAGTGA AACACTATTA CTAACAAGAT TAGTCAGGTA TTAGAAGAAA 720 TGAGGCTTGC AACTCAACAA AGGGCAGAAA AGTATAGACA TGTCTTTTTT CTAAATGAGA 780 CTGTCCTTGG GTGGGCAGGG TAATGTTTCT TGAAAGTCAA TGTAATTTGT AAGGCCGGAT 840 GCAGTGGCTC ACGCCTGTAA TCCCAGCACT TTGGGAGGCT GAGGAGGGTG GATCACGAGG 900 TCAGGAGTTC AAGACCAGCC TAGTCAAGAT GGTGAAACCC CATCTCTACT AAAAATACAA 960 ACATTAGCTG GGCATGGTGG CCGGCACCTG TAATCCCAGC TACTCGGGAG GCTGAGGCAG 1020 AGAACTGCTT GAACCCGGGA GGTGGAGGTT GTAGTGAGCC GAGATCGCGC CACTGCACTC 1080 CAGCCTGGGC AATAGAACGG GACATTATCT CAAAAAAAAA AAAAAAAAAG TCAGTGTAAT 1140 TTACAACAGC AGTTTCTAAA TATTAAAAAA ATCCTTCACA CATGTTATAT GTCTTACTTT 1200 TAAAAAGTTG GATCTCAGCC ATACTCTAGA GTACTTGGGT TTCAAAAGTC AGAAAGGAAA 1260 ATAAAAATAA GGACTCATCG ATGGAGTACT GATAAGCTGC AATGTCCTTT GAGTAACTCA 1320 AGACCAAAAA CCAAAAGATA ATGCCAGGAG AAAAACAGGG AAGTGGCTAA ATGACAAAGT 1380 ATCTGAACTT CTGCTTAAGA CAAAGGACAC AATTACGCAA AAAGCTATGC ACGGGAAGAT 1440 AACATGGCAG GAATGAAAAC AGCTATCAAT AAGGATAGTA ATATTGTGGG TGATTTTTTT 1500 CTTTTTGAAA ATTTTCTTAA ATTATGTTAT TATACTGTGT TTTCAGTTTT TAAAAAGGAC 1560 CGAAAAGTGG GGAGGGGCAG TACAGGAAAA CACACCGTGG GAACAGAGTC AAGCACACAG 1620 ATGGTTTGCG TAAGCTAAAT TTTCAGACAT CTGCCTTTGT GCAAGACTGG AAAAAGTAGA 1680 GCTGCTGTCA ACAAGTTCTC TGCAGTGAGA GAGGGGTGGA GCCTGAGAGA AAGTGAACCG 1740 TGAAGAAACC AACAATCCGA AGCCACAGGG CTGAAGAACA AATAATTTCT TAGATTAAGT 1800 TCCTCATTTA TGAGCTACCC CTCTTCCCAA AATGCTTTGC CATCGGCAAT GTCTACTACT 1860 CAAATAAGGA GACCTTAAGC TGCCCATATG TCTCCACTTA AGTGACTGAG GTTCTCTGTC 1920 AGTAGCACTA CTTAGCTCTA TGCAAGATAT CCCATCTCTG TGGGCAAGAT ATCCCATCTC 1980 TGTGGGAGAT GAGATATGGT ACAATATACT GTATAAAAAT CTGGGTGAGA TGCAAATGGC 2040 CCCAAACCTC CCTTCATTTT CCAATTCCAA ATAAAAAAAA GCTTATCATG TACAGAAAAC 2100 TCATGTAAAA GCAAAGACAA TACAGTTGTT CATCTGCTCT ACTGCCTTGC TTTGATATAT 2160 GTTTAACTTT ATTTCTGTTT AGTTAAATGA ATACTCCTAG GCCTATATTG TTTGCTCTTG 2220 CATGTAAGGC AATGAAGGGA AATTGCCATT CACACTGCTT TATATAGTGC CCAGTGTAAC 2280 GCTATATACA CAGTGCTTAA TGAATGTGAT CTGAAAATGG CAATAGGGAA GCTGAAGACT 2340 CAAGAACACT TTGGAAGATA AGAAAGTATG GAAGATATTA CAAAACCTCT TCTCTGGTAC 2400 ATGTGAAGAA CGGGAAGGTA ACATGGCAGG AATGGAAATG GCCCTAAGTA AGGAACTTAA 2460 CATTGTGGGT AATTTTTTCT CTTTTTGAAA ATTTTCTTTA ATGATATTAT TCTGTGTTTT 2520 CAATTTTTAT AAAGGACCAA AGTGATTCTG GGGTGGGGGG TAGGGCAGCT CTTCTGGCAG 2580 GTGAGAAAGC CCACATTTGT CATACAAACC ACAGGAAAGG CCTTATTTGT TCTTGTTTGC 2640 AGCCTTTAAT CAGGCCTCAT GCTAGGGGGA ACTTCTTCCA CTTGAAAAAT TTACTTGCAA 2700 AGTTCTATCT GGTGTTCTGT CTTGAACTTC CCTTTTCTGA GAAGTTGGGT GTATTGTATG 2760 GGATACTCCC ATACATCTAC CTTCTGGGCA AACTGACTAC AAAAGATGTG GGAAATCTCT 2820 TGTTCAGGCA CAGTAGCCTC TCTTAGGTCC TATATAAGCT CCTCTTCCTG AATTCTCAGT 2880 CAGTTAATTC CACATAGTTC ACAGGACCCA CATTTTCCTG TTGGTGACAG CAAAAGCTAC 2940 AACAGACCAA ATTATAATTT AATCAACTAG ATACAGATTT TAACTCAAAG GTGTAATACA 3000 TGCAAAACAG AGGAAGGTGC CTATTCTTTC TGTACTCATA TAATCTAACT GAGGTTTTAA 3060 AATGTGGATG TCAGAACCTA TTCTAGCCGG GCAGGGTGGC TCACACCTGT AATCCCAGCA 3120 CTTCGGGAGG CCGAGGTGGG TGGATGGCCT GAGGTCGGGA GTTCAAGACC AGCCTGACCA 3180 ACATGGTGAA ACCCCATCTC TACTAAAAAT ACAAAATTAG CCGGGCGTGG TGGCACATGC 3240 CTGTAATCCC AGCTACCTGG GAGGCTGAGG CAGGGGAATC ACTTGAACCC GGGAGGCGGA 3300 GGTTACAGTG AGCCAAGATT GTGCCATTGC ACTCCAGCCT GGGCAACAAG AGCAAAACTC 3360 TGTCTCAAAA AAAAAAAAAA AAAACAAAAC CCTATTCTAA GGACCCAGAT TACCAAATCT 3420 TTTTTTTTTT TTTTTTTTTT TTCAAAGAGA CAGAGTCTCG CTCATTGCCC AGGCTGGAGT 3480 GCAGTGGTGC ATTCTCAGCT CACTGCAACC TCCACCTCAC GGGTTCTAGC AATTCTCCTG 3540 CCTCTGCCTC CCGAGTAGCT GGGATTACAG GCGCATGCCA CCATGCCCAG CTAATTTTTG 3600 GTATTTTAGT AGAGACAAGG TTTCACCATG TTGCCCAGGC TGGTCTCAAA CTCTTGAGTT 3660 CAGGCAATCC ACCCACCTCG GCCTCCCAAA GTGCTAGGAT TACAGGTGTG AACCACCGTG 3720 CCTGGCCGTT AATTTTTTCT GAAGGTGTTC TAGTTGATTC TGAAACTCAG TTTGGTTTGA 3780
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