EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-03142

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr12:53472310-53473090

Target genes

Number: 18
Name	Ensembl ID

KRT78	ENSG00000170423
KRT18	ENSG00000111057
KRT8	ENSG00000170421
EIF4B	ENSG00000063046
RP11	ENSG00000257475
TENC1	ENSG00000111077
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
SOAT2	ENSG00000167780
ZNF740	ENSG00000139651
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637
SP1	ENSG00000185591
PRR13	ENSG00000205352
PCBP2	ENSG00000197111

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr12:53472990-53473000	GCCCCGCCCC	+	6.02
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	+	6.07
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	-	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_56430

chr12:53472238-53475574

u87

Enhancer Sequence

ATCATTCCAG CTGCTGGTTG GAGAACTGAT CACAAGAGGA TCAAGAACAG ATGTGGGCAA 60
ACAATTCAGA CGTTGTTGCA GCAGTTCACA TGAGAAATGA CATCCACTAA GTCGGTAGCA 120
GCGCCGATGG ATGGGGGTGG GATGATCCAG GTATTTAAAC AACCATCAGT CCCTACATAT 180
AAATGAATGA ATGATTTTTC CTGGGAGCCA AAAGTGAGAA AGAGGTGAAG TACTCTTCTC 240
TTCCCATTCC CTAAACACTG GGACAGGGGT TTTCTTGAGG CCTGACATTG CCTTGCACAC 300
GGTAGGTGCT TAGTAAGCCT TGGCTGGGCT GAATTTGATC CCAATACGCA AATTACGACT 360
CTTATGCAGT AGCTACAACC CACCACGTGG CCCAGAAGAG TAGGCACCTG TGGGACAGAC 420
AGCCCTAAGA TTCCACTCCC GGGCACTCAG CCAGGACTCA ACCCCAGGTA GATGCTGGTT 480
GCGCAGACCC CACAGTCTTG GCACCGGCGA GTGGCGGCCC TACTGGGCCC TGTCTCCTCC 540
CCGGGCACGG CCTGATCACT GAGATGAGAC CCGGGAGCAG CCGGGCCCCA GCCCATCCGT 600
GTGCCTACGC CCAGTCTCCC CAGGCCCTGC ACTGGGCCGA GGGTGCAGCA ACAGAAGAAG 660
CCCAGTGACC AGAGCGCAGG GCCCCGCCCC TGGCCCCAGA GCCCCCGCCC AGGACCCCCG 720
CCTTCCGCTT CAGGCTCCGG GGAGATACGA GGCCTCCGGG ACCCCGCCCC CGATCCCCGC 780