EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS073-02479 
Organism
Homo sapiens 
Tissue/cell
GM19238 
Coordinate
chr11:65253970-65255230 
Target genes
Number: 42             
NameEnsembl ID
EHD1ENSG00000110047
ARL2ENSG00000213465
SAC3D1ENSG00000168061
NAALADL1ENSG00000168060
CDCA5ENSG00000146670
ZFPL1ENSG00000162300
C11orf2ENSG00000149823
AP003068.6ENSG00000187066
AP003068.9ENSG00000254501
TM7SF2ENSG00000149809
ZNHIT2ENSG00000174276
MRPL49ENSG00000149792
FAUENSG00000149806
SYVN1ENSG00000162298
HIGD1AP10ENSG00000254455
PGAM1P8ENSG00000249251
AP003068.18ENSG00000255200
CAPN1ENSG00000014216
AP003068.23ENSG00000254614
POLA2ENSG00000014138
CDC42EP2ENSG00000149798
DPF2ENSG00000133884
TIGD3ENSG00000173825
SLC25A45ENSG00000162241
FRMD8ENSG00000126391
NEAT1ENSG00000245532
AP000769.1ENSG00000173727
MALAT1ENSG00000251562
SCYL1ENSG00000142186
LTBP3ENSG00000168056
RP11ENSG00000260233
SSSCA1ENSG00000173465
FAM89BENSG00000176973
EHBP1L1ENSG00000173442
RELAENSG00000173039
RNASEH2CENSG00000172922
AP5B1ENSG00000254470
MUS81ENSG00000172732
CFL1ENSG00000172757
FIBPENSG00000172500
CCDC85BENSG00000175602
BANF1ENSG00000175334
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr11:65255002-65255020GGAGGTCAGGAAGGAAAG+6.13
RFX1MA0509.2chr11:65255021-65255037AGTTGCTATGGCAACA+6.78
RFX1MA0509.2chr11:65255021-65255037AGTTGCTATGGCAACA-6.78
RFX2MA0600.2chr11:65255021-65255037AGTTGCTATGGCAACA-7.13
RFX2MA0600.2chr11:65255021-65255037AGTTGCTATGGCAACA+7.15
RFX5MA0510.2chr11:65255021-65255037AGTTGCTATGGCAACA+7.38
RFX5MA0510.2chr11:65255021-65255037AGTTGCTATGGCAACA-7.42
ZNF263MA0528.1chr11:65255097-65255118GAGGGATGGGGGAGAAAGGGA+6.06
Number of super-enhancer constituents: 71             
IDCoordinateTissue/cell
SE_00028chr11:65250988-65277615Adipose_Nuclei
SE_00879chr11:65253195-65254978Adrenal_Gland
SE_01577chr11:65253818-65262467Aorta
SE_02242chr11:65253964-65262748Astrocytes
SE_02898chr11:65254006-65255064Bladder
SE_03165chr11:65253779-65258378Brain_Angular_Gyrus
SE_03882chr11:65252507-65262880Brain_Anterior_Caudate
SE_04846chr11:65252181-65262791Brain_Cingulate_Gyrus
SE_05895chr11:65250838-65275661Brain_Hippocampus_Middle
SE_06693chr11:65252147-65276599Brain_Hippocampus_Middle_150
SE_07762chr11:65250696-65262852Brain_Inferior_Temporal_Lobe
SE_08788chr11:65253928-65255129Brain_Mid_Frontal_Lobe
SE_09268chr11:65254148-65256277CD14
SE_12859chr11:65255098-65255881CD34_Primary_RO01480
SE_13317chr11:65254385-65255165CD34_Primary_RO01536
SE_14049chr11:65254463-65256148CD34_Primary_RO01549
SE_23775chr11:65255041-65258405Colon_Crypt_2
SE_25770chr11:65252372-65276621Duodenum_Smooth_Muscle
SE_26547chr11:65252543-65262946Esophagus
SE_27634chr11:65253802-65258438Fetal_Intestine
SE_28555chr11:65252858-65262651Fetal_Intestine_Large
SE_29556chr11:65252771-65276612Fetal_Muscle
SE_30929chr11:65254039-65256553Fetal_Thymus
SE_31424chr11:65252932-65262941Gastric
SE_33163chr11:65253828-65255072H1
SE_33445chr11:65252127-65258476H2171
SE_34266chr11:65252073-65262837HCT-116
SE_34617chr11:65237426-65277580HeLa
SE_35831chr11:65252552-65262853HMEC
SE_36925chr11:65252260-65275698HSMMtube
SE_37995chr11:65253943-65262751HUVEC
SE_38870chr11:65253832-65255145IMR90
SE_40612chr11:65253804-65266678Left_Ventricle
SE_41603chr11:65253853-65254890LNCaP
SE_42107chr11:65253824-65266681Lung
SE_43442chr11:65253831-65255109MCF-7
SE_44137chr11:65252735-65262954NHDF-Ad
SE_44750chr11:65253791-65275500NHLF
SE_45562chr11:65252799-65275714Osteoblasts
SE_46695chr11:65253925-65255034Ovary
SE_47127chr11:65243490-65277571Panc1
SE_48070chr11:65253942-65269802Psoas_Muscle
SE_48581chr11:65253787-65258461Right_Atrium
SE_49457chr11:65254304-65254937Right_Ventricle
SE_50062chr11:65253835-65262568Sigmoid_Colon
SE_51077chr11:65252635-65277472Skeletal_Muscle
SE_51697chr11:65254242-65262983Skeletal_Muscle_Myoblast
SE_52357chr11:65253845-65262584Small_Intestine
SE_54029chr11:65253993-65262983Spleen
SE_54503chr11:65243495-65276614Stomach_Smooth_Muscle
SE_55162chr11:65254434-65254894Thymus
SE_55732chr11:65252807-65255220u87
SE_56764chr11:65253901-65254808VACO_400
SE_57928chr11:65254229-65254855VACO_9m
SE_58932chr11:65238587-65276390Ly3
SE_59720chr11:65237780-65272476Ly4
SE_60674chr11:65238641-65271340DHL6
SE_61239chr11:65237836-65278618HBL1
SE_62240chr11:65238321-65275907Tonsil
SE_63249chr11:65244238-65267283GLC16
SE_63391chr11:65243820-65268347NCI-H69
SE_63485chr11:65254228-65262853HSMM
SE_64233chr11:65253928-65256664NHEK
SE_65450chr11:65253579-65270152Pancreatic_islets
SE_66874chr11:65252127-65258476H2171
SE_67468chr11:65252807-65255220u87
SE_68042chr11:65238458-65277023TC32
SE_68043chr11:65238458-65277023TC32
SE_68495chr11:65243635-65267694TC71
SE_68496chr11:65243635-65267694TC71
SE_68897chr11:65253783-65258392H9
Enhancer Sequence
AGAACTGAGA CAAAGAGAGG AAGAGTGACT TGCTGGAGGT AACAGGGTGC CACTTAAATG 60
GCACAGCCTA GGGTAGAACC CAGGGCTGCT GGTGCCTCGT CCAGGGTTTG CTCCACTCAA 120
CGTTTTACCT GCTATGAACT GACCCATGTT GTTTTCGTCA TTCTAGTCAG TACCTAGAAA 180
GACAGCTGTG TGGACTAGCT GCTGGACCAC CAGGCTTTAA GTCTTGACAT TGCTATTTAC 240
TGGCTGTGCA ACCTTGAGCA AGTTTACTTA ACTTCTCTGG GCCTCCATTT CCTCATCTGT 300
AAAATGGGTA GGTGCTGTAA TCATGACAGT TATCTTCCGT GAAAATTCAG TGAATGCATG 360
TGCCGCAGTG CCTGCCATGT AGAAAGGACT CAGTGCAGCA TAGCTGCATT TTCACCTCCT 420
ATATGGATGG TAAGTTCCAC AGATTTATTA CGGAAAGCAG GCTGGCCTTT AACTTAGGGT 480
CATGGAATGT CAGAGCTGGA AGGGGCCTCT TGAGTTAACT AGAGAGGCGT CCTTTTACAG 540
GAGAAAATGA GTCCCTGGGG GCCTGCGTGA CCTGCTGAAG GTCCCAGGGG CTTTTGGTGA 600
CAGAACAGGA ATCAAACTCC AAAGGGGTCC TCTGTCCTGG GGCTCTGGGC TTGTTGAACA 660
AGTCAGCTGC CCCATCCTCC AATTTATAGA GCCATTAGCC CAAGGGAGTG TCAGTGTTGG 720
TCAAGTAAAG ACACGTGGAA GTGCACGGAG CTCTACAGTT TACTAACAGC ATTTGCAAAG 780
TTGGAGCCTT ACTCCAGCCT AGAAGGTGGT GAGTGCTGGA ATGAATATTC CATTTCACAG 840
AAAGAAACCA AGGCCCCCAG GGATGAGTTG GTAACCAAAG CCATGGGTAG AGGCACAGAA 900
ATTCCTTGAC TACTCTGGAA AATGAGGGAG TTCACCTTCA AGAGAAGAAA GTTAGGTCAG 960
TATAAAATGG CTGACAGCCT CTTCTGCCTT CAGAAAAGTA CTTCAACTGC AAAGTCAACT 1020
ACTAACTTCC AAGGAGGTCA GGAAGGAAAG CAGTTGCTAT GGCAACATCT TTGGCAGCTA 1080
TTTTCATCCT TCTCTGGTTC AGAACAGCTT CCAGCAGGTT CCTGTGGGAG GGATGGGGGA 1140
GAAAGGGAAA GGCTAGCTCC AGCCCAGCAA CTGTCCTCAG CCAATCTCCC ACCAGATTTC 1200
GGTGGCAAGA GGAAGGTGGC AGCCAATGAA GAGGCTCGGA GCTTGCATCA TCCTCCTGAC 1260