| Tag | Content |
|---|
EnhancerAtlas ID | HS073-01357 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr1:226039370-226040360 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr1:226039969-226039984 | GAGGTCAGGAGTTCA | + | 6.22 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_04909 | chr1:226038991-226052376 | Brain_Cingulate_Gyrus | | SE_05837 | chr1:226029277-226050904 | Brain_Hippocampus_Middle | | SE_06795 | chr1:226029431-226048398 | Brain_Hippocampus_Middle_150 | | SE_07978 | chr1:226039034-226046265 | Brain_Inferior_Temporal_Lobe | | SE_11743 | chr1:226033094-226042126 | CD20 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 226039426 | 226040000 | | chr1 | 226039506 | 226039808 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I225851 | chr1 | 226039021 | 226040763 |
|
Enhancer Sequence | CAGGTTCTTT TTTAAAAAAT AAATTTTGTT TTGAAAGTGT AAATACTGTA GATTTTTAAA 60
ACTACACAAG AAAGTATACA GGGAAAACTA AAACAACTTT TCCCCCTAAA ACTCAGCTAT 120
CACTGCCAGC AGTCTCTTGG GTTTTTTGTT TCCTTCTAGA GCCTTTCATT AATCTGCCAG 180
TTGCAGATGT TTTATTTCAG TGGCCAGGAC CTTGGTCTTT AAACAGTCCT GAGTTCAAAG 240
GCTGGTTCTC CTGCTTACTA ACAACATACG AAGTTATTTT GTGTGAAGGG GGAATAGAAA 300
CAGGAACTGC CTTGTAGGAT GAGGTGAGAA ATGTGGTAAT CCACGTGGAG GCAGGCATCT 360
GCCAGAGTGA AAGCAGCACG AGAGCTTTGA TTGTGACTCT GGCACTGTCT TACTTGCTGC 420
TAAAGAAATC AACCATGAAC GACATAGTCA GTGGGCAGAG AACCTCAGAC CAGAAATACT 480
AAGAGAGGTC CTAGCTGAGG GCCAGTGGGA GGAATTCATT TAAAAATGAA TGAGGCCGGG 540
TGCTGTGGCT CATGCCTATA ATCCCAGCAC TTTGGGAGGC TGAGGCGGGT GGATCACCTG 600
AGGTCAGGAG TTCAAGACCA GGCTGGCCAA CATGGTGAAA CCCCATCTCT ACTAAAAATA 660
CAAAAAGTTA GGCAGGCATG GTGGCGGGCA CCTGTAATCC CAGCTACTCA GGAGGCTGAG 720
ATGGGAGGAT GGCTTGAGCC CAGGAGGTGG GGGTTGCAGT AAGCCAAGAT CATGCCACTC 780
CAGCCTGGGC ATCAGCATGA GACCCTGTCT CAAAACAAAA AAAGAAAGAA ATGAGTGAAA 840
TCTGGTGTCA CGTGAGTCTT TAGCAGCTTG TGGCTCTTGT GGCTGTGGTT TTGGGAACTC 900
CATTGTGCCC TGGTGATAGC TGTCCCCGAG AGGTTTGGTG CAATCAGCCG TCCATGTACC 960
CATGTACCCT GGGACAGGCT CCAGGGCCAC 990
|
