EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-00899

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr1:149782220-149783430

Target genes

Number: 26
Name	Ensembl ID

HIST2H3PS2	ENSG00000203818
PPIAL4C	ENSG00000198161
RP11	ENSG00000232151
AL358813.2	ENSG00000203815
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H3C	ENSG00000203811
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
OTUD7B	ENSG00000163113
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
APH1A	ENSG00000117362
MRPS21	ENSG00000187145

SNPs

Number: 2
ID	Chromosome	Position	Genome Version

rs57324102	chr1	149782833	hg19
rs2664726	chr1	149783072	hg19

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr1:149782649-149782660	AAGAGGATTAA	+	6.14
EWSR1-FLI1	MA0149.1	chr1:149783191-149783209	GCCTCCTTCCCTCCATCC	-	6.3
EWSR1-FLI1	MA0149.1	chr1:149783195-149783213	CCTTCCCTCCATCCCTCC	-	6.57
ZNF263	MA0528.1	chr1:149783191-149783212	GCCTCCTTCCCTCCATCCCTC	-	6.12

Enhancer Sequence

GAAATTCACC CCACATATTA ACTGTGGCCT TCTCTACACC ACAAATTCCC CTCCACTCAT 60
CCTCAAATTG TTTCCTTTCT CAGGACATCT GTGACACAAA GACTGTGACA CACCCACAGG 120
TCGATTAACA TGAGGACCCA ACACCTATTA AAACATCCAC ACTCCTGAGA ACACTAAAAA 180
CCAACCACCT CGTCAGGTCC CACCTCCAGT CTAGCTGAAT CAGGAAACCT CAGGAGAAGC 240
ACCTGGAAGC AGGTTTAACA AGCGCAAAGG TGACTCTTAT AATTGGGAAA GTTTGGAACC 300
AAGACAGGGT TCTTGTCCTG GAGGAAGTAT TTTCCTGTGG AGAAGGACCT GTAAACAGCC 360
TATGAAGTGC TCAGCTTTCA CCAAGAAAAG AAAAACATGG GCTGATAGGG TTAAGGAAAC 420
GTTTGACTGA AGAGGATTAA ATCCTGAAGG TTAGGGATGT CTTTGGGCGC TGGGGTCTCT 480
CAATCACCAA AGATCGACAT TACAGGCCAG GTAGCTCTTT GTCCCCCCAG AGGACTGTCC 540
TGTGCCTTAT GCTTAGCACT CCTGGCCTCT GCCCATTGGA TACTTCTAGC ACCTCCCCCG 600
CAACACACAC ACACCTGACA ACCCAAAACA TCTACAGATA TTGCCAAATA CTCCACAGGG 660
GGTGGGGTGG TGGCAATATA TCTCCCTGTT TGAAGTCACT GGAATGGAAG TTAGGGGAGG 720
ATGGCTAAGT CAGGACTTGC AAAAAGGCTA AGGGACGAAA GCACATGGCT ATATTAGACA 780
AAGTTTGTGA CAGACGCCTG TAGGTATATG GTAAGGAAAA CAGATTAAAA CACTAAGAAA 840
TAGTAAGAGG TCGGACCGAG GGTTTCTCAT CTGTATGGGA AATCTCATCT CGTTCATTAC 900
TTTCAGAAAC AAAAAGGAAA ACGACTTTAA AGATACAGGT TAAAGGCCGA AGGGGTGTAG 960
AACCACCCCC CGCCTCCTTC CCTCCATCCC TCCCAAATAT CCCAGAACGA GTCAAACCTT 1020
TCGAATCTCG TAGCACAGAT AACAAGCAAC TCAGTAAGAC TGGACGGGGA TGACTGAGGG 1080
CCAACTCATT ACAGGACTAC AGGAAACTCC TTAGTCCTAA ACCCGAATGC ATCCGTGACC 1140
ATGGTAACAC TCCCTACCTG ACCAAAAGCT ATCAAACGCT CTGACAAGTG TTTACAGCTG 1200
CTTTCTCGAT 1210