EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-00898

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr1:149679370-149680770

Target genes

Number: 25
Name	Ensembl ID

HIST2H3PS2	ENSG00000203818
FAM72C	ENSG00000203817
PPIAL4C	ENSG00000198161
RP11	ENSG00000232151
AL358813.2	ENSG00000203815
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H3C	ENSG00000203811
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
APH1A	ENSG00000117362

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:149679437-149679452	TGAACTCTTGACCTC	-	7.64
RARA	MA0729.1	chr1:149679434-149679452	TCTTGAACTCTTGACCTC	-	6.45

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I121015	chr1	149678963	149680437
GH01I145160	chr1	149679185	149680660

Enhancer Sequence

ACCACATTCG GCTGATTTTT GTATTTTTAG TAGAGACGGG ATTTCACCAT GTTAGCCAGG 60
CTGGTCTTGA ACTCTTGACC TCAAGCGATC CATCCGCCTC GGCCTCACAA AGTGCTGGGA 120
TTACAGGCGT GAGCCACCGT GCCTGGCCAA ATTTCAGGCC AACACCTGTT GACACACATT 180
GCCAGACACA CGGAATCCCT CACTGAACAC CGATGGGCCC ACAAAACACG CGGAGGCCAC 240
GGTGGCTGAA GATGTTAGCA AATTCGGTTC GCGGTGTCTG GGGTACAGCC TCGAGGGTCC 300
ATTGGCTACC TCTGTGCAAG GACCACTCTG CGCAAGGACC AGTCACCGCT GCTCTCCTCA 360
TCTCCATTGA GATTCTCCCG CACACACCTC CCCTTTCTTT GGGCCGCTGA GGCCTCTTGG 420
ACCTCCGAGG TGATTGCCCC GCCCGCAGCT TCTCTCCCTC CGGGAGCTTC ATTTCTTGTT 480
CCTCTCCGTA GTGGCTCAGC GGTAAGCCCA AGGTCCAGCA CACGAATCAG GAAACTGATG 540
GTTCTTGGGT TAGCAGGAAT CCGCCCAGAG AACAGATGAA AGTAACAGGT ACCAATATCA 600
AAACTGCAGT GACTCACCAG AAACACTACG TGCTTGCCAC TTTGCTTAGC GGTTTGTTGA 660
GTCCAACAAC TGCGTGGGTC CCGGGTTAGT CTCCTGAATA TCTTTTGCTG CTACTTTGGT 720
CAGCGTTGTT GTCAGTTTAC CTTGTGGTGG CCAAGCCCTT AAATGCACTA TTAGGTTATG 780
CAGTGTAATT CTGCAGGGCA GAAGGGTAAA GAGCCATAGT GAAGAGCAAA AATACCTCTT 840
ATCTTGACCG GGAATTAAAC CCGGGTCTCC CGCGTGGGAG GCGAGAATTC TACCACTGAA 900
CCACCAGTGC CTCTCTCTAG CAACCCTGGG AGAATTATCA AAAAGAGTAT CCAGAAAGAC 960
TTAGAAACTT CCAAGCGGCC TTTTCAAGTG TCGACTCAAA GCTAACAAAG ACATCCAAAC 1020
CAAATGTTTT TATAGGAAAC TTTTACTAAA CAAAGTTATA AATATCAAAA TAGCTCATTT 1080
GTCGGATCAA ACTCTTAACT CTGAAAAAGG TCTTTCTACC TGCATTACAT ACCCCTATAA 1140
TAAAACGTCA CAAATTCATT CATGTTTCTT TTTTCTAATC CTAAATCTTC AATTGTCAAC 1200
GTCAAACTGC TGCCTTAGTG GTTCTGAGAA GGTAACCTAA CTGGTAGCTT AGGTAAGTAA 1260
AGTTCTAATC CAGGGAGGAA ATAAGAAGCA GAAGCAGAAT TAGAATTAGA GGAAAGAGGA 1320
AATAAAAGGA CAGAATCAAG GTAGAGATAA TGAAGAAACA AAGGTTGGTC CACTGAGTTA 1380
GTCTTTTGTC GCTGGTTTTT 1400