| Tag | Content |
|---|
EnhancerAtlas ID | HS073-00247 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr1:25053910-25054530 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Lhx3 | MA0135.1 | chr1:25054420-25054433 | TAATTAATTAACT | + | 6.64 | | Nr2f6(var.2) | MA0728.1 | chr1:25053944-25053959 | TGAACTCCTGACCTC | - | 6.22 | | Nr5a2 | MA0505.1 | chr1:25053936-25053951 | GTTGGCCTTGAACTC | - | 7.29 | | RARA | MA0729.1 | chr1:25053941-25053959 | CCTTGAACTCCTGACCTC | - | 6.73 | | RELA | MA0107.1 | chr1:25054347-25054357 | GGAAATTCCC | - | 6.02 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_37045 | chr1:25050256-25054919 | HSMMtube | | SE_56631 | chr1:25053067-25054803 | u87 | | SE_63833 | chr1:25053730-25054437 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I024724 | chr1 | 25050494 | 25054850 |
|
Enhancer Sequence | TTTTAGTAGA GACGGGGTTT TGCCAAGTTG GCCTTGAACT CCTGACCTCA GGCGATCCAC 60
CTGTGTTAGC CCCTCAAAGT GCTGGGAATA CAGGTGTGAG CCATGACACC CTATACGTGT 120
AGCTTTTTAG AAAGCATAAC AGCACTCTCC CCTCCACTTT CAAAAGTGGG CCCCAGCGGC 180
TCAGACTCCC TTGCCAGTTT CACTTTGGAA AGATGCAGTA TGTGAGCAGT GCTGTCTTAT 240
TTCCCAGCTG GCCGGCCCAG GAGGCCCAGC CCCAAGGACC AGACACTGTG GGTTGGCCTC 300
GGGGACGATG ATCTAAGACA GCTGGAGTGT CTTCCTGGCT GTTAGCAAAA GAGAAACCAA 360
CTAATTCACC ACAAAGTCCT TAAAAAGAGA AGTAATAGGA TGAGTTCTGG CACCTCACTT 420
AAGTCCAACA GGAGTGGGGA AATTCCCCTA AATATCACTT GGGGATCCAG CTTTTCCCTC 480
TCTTTGAACC TCTTTGATGT TTATTTAATG TAATTAATTA ACTTATTTAA ATTTTTGAGA 540
CAGGGTCTCA CTCTGTTGCC CAGACTGGAA TGCAGTGGCA CAATCACGGT TCACTGCAGC 600
CTCGACCTCC TGGACTATAG 620
|
