EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS070-00123

Organism

Homo sapiens

Tissue/cell

GM19099

Coordinate

chr1:201979950-201980020

Target genes

Number: 8
Name	Ensembl ID

IPO9	ENSG00000198700
SHISA4	ENSG00000198892
RP11	ENSG00000223774
LMOD1	ENSG00000163431
TIMM17A	ENSG00000134375
SNORA70	ENSG00000206637
RNPEP	ENSG00000176393
ELF3	ENSG00000163435

Number of super-enhancer constituents: 20
ID	Coordinate	Tissue/cell

SE_23058	chr1:201976007-201983895	Colon_Crypt_1
SE_23723	chr1:201979630-201983787	Colon_Crypt_2
SE_24689	chr1:201976069-201983846	Colon_Crypt_3
SE_25977	chr1:201976074-201988947	Duodenum_Smooth_Muscle
SE_26730	chr1:201978138-201983936	Esophagus
SE_27624	chr1:201975812-201989193	Fetal_Intestine
SE_28545	chr1:201974530-201989440	Fetal_Intestine_Large
SE_31432	chr1:201976008-201983923	Gastric
SE_33417	chr1:201978180-201980492	H2171
SE_33792	chr1:201978127-201990221	HCC1954
SE_34304	chr1:201974676-201989923	HCT-116
SE_34741	chr1:201978054-201981937	HeLa
SE_41626	chr1:201979682-201980814	LNCaP
SE_47796	chr1:201979642-201980782	Pancreas
SE_50066	chr1:201978058-201988672	Sigmoid_Colon
SE_52354	chr1:201976011-201988714	Small_Intestine
SE_56834	chr1:201979732-201980945	VACO_400
SE_57376	chr1:201979637-201983703	VACO_503
SE_57945	chr1:201979678-201980786	VACO_9m
SE_65333	chr1:201978031-201985568	Pancreatic_islets

Enhancer Sequence

AGGTGTCCTG AGGGTCAAAG AACAGAGAGA GATTGTCTCT GGGAAGGCAG AATGGCCATG 60
ACGCCGCTAG 70