| Tag | Content |
|---|
EnhancerAtlas ID | HS070-00025 |
Organism | Homo sapiens |
Tissue/cell | GM19099 |
Coordinate | chr1:25251310-25252760 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr1:25251740-25251758 | CCCTCCTTCCTCCCTGCC | - | 7.01 | | RELA | MA0107.1 | chr1:25251676-25251686 | GGGAATTTCC | + | 6.02 | | TBX21 | MA0690.1 | chr1:25251406-25251416 | TTCACACCTT | - | 6.02 | | TBX21 | MA0690.1 | chr1:25251786-25251796 | TTCACACCTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_11909 | chr1:25245250-25256528 | CD3 | | SE_15299 | chr1:25250753-25257810 | CD4_Memory_Primary_7pool | | SE_15507 | chr1:25250856-25257883 | CD4_Memory_Primary_8pool | | SE_16311 | chr1:25245979-25258054 | CD4_Naive_Primary_8pool | | SE_16948 | chr1:25245747-25257805 | CD4p_CD225int_CD127p_Tmem | | SE_17868 | chr1:25235585-25258091 | CD4p_CD25-_CD45ROp_Memory | | SE_18972 | chr1:25241705-25256688 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19286 | chr1:25236647-25257899 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20022 | chr1:25234379-25257824 | CD56 | | SE_20914 | chr1:25246045-25256551 | CD8_Memory_7pool | | SE_21650 | chr1:25250879-25256602 | CD8_Naive_7pool | | SE_22025 | chr1:25246912-25257900 | CD8_Naive_8pool | | SE_22463 | chr1:25234579-25256550 | CD8_primiary | | SE_32625 | chr1:25249533-25256589 | GM12878 | | SE_62407 | chr1:25236597-25293990 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 25251631 | 25252076 | | chr1 | 25252124 | 25252306 |
|
Enhancer Sequence | TAAGAAAGGC TCCTCGTGTC TGGCAGGGCA GGGACCTCAG CCCTAATCAC TGCAGGAGAC 60
AGCAATGACC TGGTTTTCCT CCCTTCCTTT TCTTGGTTCA CACCTTCAGC CCTGTTGTTA 120
AGAGCTCTGT GGTGTTACTG GGTGCGTGTC TTTCATGGAA AGCCATCTTC CTGGAATTCA 180
GACAGAATGT AGAACTAAAA ATTGAGGCAA CAAGCAGAGG TTTCCATCAG ACTTCTTAGT 240
TCTGGCAGAA GTCAAGAGAC CCAGGCAAGG GTTCTGGGTC CCAACCCCCA GTCTTAACTC 300
CCAAAGTGTC CCATCTCCTA AAGTGGCCCA GATTGTCACT GTCAACCACT GACTGTTCTC 360
TCAGGTGGGA ATTTCCCAGT CAGCAGGATG GGCACTGCAG ATGTGTGTCT GCATGCCAGC 420
GGACCCGGCA CCCTCCTTCC TCCCTGCCAA CCGCCTCCAC CTCTCCCACT CAGCAGTTCA 480
CACCTTCTGG GTTTCCCCCA CCCCCGCCCA AACCACACAG TAATCAGAGA ATCAGTGGCT 540
GTCACCGCTC AAAGGGACCT CAAAGTCCTC CTCCAGTCCC AGGCATTTGA AGTAACAAAA 600
TCTCTAACAT GTATCCAGCT CTCAATATGC GCCAGCTGAT ACACTTGTGT CAATTTCCCT 660
AACCTTCCCA AAATCTCATG AGGTAGGTAC CATTATCATC CCCATCTCAC AGATGAGGAA 720
ACTGAGGCAC AGAGTGGTTA AGTCATTTGC CCAATGTCAT CCAGCAAGTC ATTAGCAGAG 780
CTGGGACTCA AACGCAGGGT GGCTGATACT AGAATGCAGG CTCTCAAAGA CCTCGAGCCT 840
CTGAAGGCTG AACGCCTTAG CCACAGTTCC TCAGACATCG GAACTCCTCC TCAGATCACT 900
TCCTGCCTCC CAGGACCACT GAGACTGGTT ATGGACCTCT GAGAGGAGAT GGATGAGAGA 960
ATGGTTTATA AACTCAGCCT CTTGCATCTC CCAGAGCCAC AGTCCCAGCC TCGGCCATTC 1020
CTGCTACAAG GACAAGCTCC CAACCAACGC CTTGGAAACC CATTTCCCTC CCTGCAGGCC 1080
TGGGGAGGGG GGCTCAAGGT CTGTGGGCAT GAAAACCCCT AAAAAAATCA TTCTCAGTGT 1140
GCAGAATGGC CAGACAAGGT CTCGGTAACT CAGAAAATCG TCGTCTCTTC TCTTTCTCTC 1200
GCTTCCCAGG AGAGAGAGTG GGAAGGGAGA ATCAAGTTCC TGATGCCTTG CTGGGCTCCC 1260
AGATCGACAG CACCTTCTGC CCGCCTCGCA ACAGGCAGCA GCTATAGTGC TCCTGACACA 1320
TACCTGGGCT AGCAGACCTG GCCACTGCCC CGCAGTCAGC AGAGCTCATC AGCCTTGTCT 1380
GCCACCGACC AAGGACCAGT GACTGTCCTC TCAGGGTTGG GATTAAGTCG CAAAGGGTTT 1440
GAGAGATTGG 1450
|
