EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS069-02259 
Organism
Homo sapiens 
Tissue/cell
GM18951 
Coordinate
chr12:125388990-125392130 
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxd3MA0041.1chr12:125390142-125390154GTTTGTTTGTTT+6.32
NR2C2MA0504.1chr12:125389268-125389283AGATGTCAGAGGTCA+6.5
NR2F1MA0017.2chr12:125389274-125389287CAGAGGTCATGGG+6.22
Number of super-enhancer constituents: 63             
IDCoordinateTissue/cell
SE_00230chr12:125388338-125390251Adipose_Nuclei
SE_01093chr12:125388919-125390122Adrenal_Gland
SE_01093chr12:125390375-125390754Adrenal_Gland
SE_02134chr12:125388897-125389573Aorta
SE_03321chr12:125388972-125389652Brain_Angular_Gyrus
SE_04055chr12:125388824-125389967Brain_Anterior_Caudate
SE_04055chr12:125390281-125391673Brain_Anterior_Caudate
SE_05165chr12:125388544-125390177Brain_Cingulate_Gyrus
SE_05165chr12:125390248-125391730Brain_Cingulate_Gyrus
SE_06190chr12:125388553-125390227Brain_Hippocampus_Middle
SE_06190chr12:125390265-125391742Brain_Hippocampus_Middle
SE_06843chr12:125388893-125389997Brain_Hippocampus_Middle_150
SE_06843chr12:125390533-125391783Brain_Hippocampus_Middle_150
SE_08021chr12:125388566-125390207Brain_Inferior_Temporal_Lobe
SE_08021chr12:125390248-125391661Brain_Inferior_Temporal_Lobe
SE_09364chr12:125388598-125389846CD14
SE_13397chr12:125388872-125390080CD34_Primary_RO01536
SE_14431chr12:125388878-125390194CD4_Memory_Primary_7pool
SE_20773chr12:125388894-125390071CD8_Memory_7pool
SE_23158chr12:125388934-125389702Colon_Crypt_1
SE_23827chr12:125389232-125389576Colon_Crypt_2
SE_25623chr12:125390772-125391589DND41
SE_25834chr12:125388864-125389970Duodenum_Smooth_Muscle
SE_26681chr12:125388907-125389569Esophagus
SE_27703chr12:125388877-125389964Fetal_Intestine
SE_28633chr12:125388803-125389938Fetal_Intestine_Large
SE_28633chr12:125390817-125391748Fetal_Intestine_Large
SE_29734chr12:125388906-125389466Fetal_Muscle
SE_31649chr12:125388881-125389600Gastric
SE_32526chr12:125390355-125391471GM12878
SE_34384chr12:125388875-125389982HCT-116
SE_34384chr12:125390813-125391499HCT-116
SE_34668chr12:125388535-125389975HeLa
SE_35334chr12:125388863-125389956HepG2
SE_35911chr12:125388867-125390037HMEC
SE_37255chr12:125388735-125390213HSMMtube
SE_39917chr12:125388941-125389977K562
SE_40930chr12:125388918-125389785Left_Ventricle
SE_42024chr12:125389206-125389610LNCaP
SE_42298chr12:125388901-125389697Lung
SE_44403chr12:125388797-125390012NHDF-Ad
SE_44876chr12:125388857-125390115NHLF
SE_46113chr12:125388854-125390112Osteoblasts
SE_47332chr12:125388099-125390028Panc1
SE_47332chr12:125390209-125391573Panc1
SE_48238chr12:125388871-125390107Psoas_Muscle
SE_48238chr12:125391041-125391674Psoas_Muscle
SE_48805chr12:125388875-125389970Right_Atrium
SE_50218chr12:125388879-125389757Sigmoid_Colon
SE_51163chr12:125388547-125390026Skeletal_Muscle
SE_52044chr12:125388880-125389479Skeletal_Muscle_Myoblast
SE_52416chr12:125388883-125389960Small_Intestine
SE_53363chr12:125388696-125390142Spleen
SE_54757chr12:125388881-125390026Stomach_Smooth_Muscle
SE_55862chr12:125388927-125390161u87
SE_57189chr12:125389000-125389646VACO_400
SE_58459chr12:125390622-125426140Ly1
SE_59670chr12:125390325-125426106Ly4
SE_60560chr12:125385312-125426018DHL6
SE_61569chr12:125389012-125425986Toledo
SE_62372chr12:125386297-125426052Tonsil
SE_63850chr12:125388879-125389620HSMM
SE_67582chr12:125388927-125390161u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr12125389117125389584
Number: 1             
IDChromosomeStartEnd
GH12I124903chr12125388260125391745
Enhancer Sequence
AGGTAAATTT TTTTTTTCTC CTTACACTGG GCCCCACAGA AGGGGGTGAG GTTTGGCTCC 60
AGGTTTGGGG GATATAGCTA AGGAAGGATG TCAGCTCTGG GCCAAAGACA GGAATGACCT 120
ATCAGATCCC CCAGGGAAGG AGCAGGACCC TGGAGCATTA ATATCTGCGG CACACAATTG 180
TGATTTCTCC GCGTTGCAAT TTCCTTTCAC TACCCCCATG TCTAGCTGTC CTAAGGAAAG 240
AGCCAGATCC CTGAGGCAAC CCAGAGAAGC CAAGTCTAAG ATGTCAGAGG TCATGGGCAG 300
AATCTCCCAA GGCAGCCAGC TGGCTGAGTG ACAAATGACA ACAAGCACAG ATTTGTGAAG 360
AGTGCAAGCA TTCTTCAGAA ACTCCCAAAA ATACCAGTGA GGAGAAACTG GTAAGTGGAC 420
TTCCTCGAGG AGTCACGCAC AGTGCAGAAC AGACCACTGT CCCACGTGCT TGCAGGGACA 480
CGCTGGCCTC TAAACACTGG CCCACACAGC GCTGAGTCAC ACTTGCCCCT CCCTCTTGCC 540
TACGGTCACT CCCCAGCCAC AGTTGATGCT AACGAGCTTC GCCCTTCACT CCCGGGAGTT 600
CGGCAGCTTT TGCACATTTT AAGATCAACT GAGAGTTTAT AAATATGCCC CGTTTTTCTA 660
TGACCATCGC TATGGGAAGA GATGAATGTG TTCTAACCTG TTTCCCATCA AAACTTGTGT 720
TCTAACCCCA AAAGGAAAAG CAGCAATAAA AACAACCAAA ACATTTTTTA AAAATAGGTT 780
CTATAGTTTC AAAAACAATA AAAAGAATAA GAGCCAAGCC TGGAGGTGCG CGCCTGTAGT 840
CCCAGCTACT TAGGAGGCTG AGGCAAGAGG ATGGCTTCAG CTGGGGAGGT TGAGGCTGCA 900
GTGAGCTGTG ATCACACCAC TGCACTCCAG CCTGGGCGAC AGAGGGAGAC ACCGTTTGTA 960
AAAAAAAAAA AATTTTTTTT TTTGAGATGG AGTCTCCCTC TGTCACCCAG GCTGGAGTGC 1020
AGTGGCGCAG TCTCGGCTCA CTGCAACCTC CGCCTCCTGA GTTCAAGCGT TTCTCCTGCC 1080
TCAACCTCCC GAGTAGCTGG GATTACAGGT GCATACCACC ACGCCTGGCT AATTTTTGTT 1140
TTGTTTTGTT TCGTTTGTTT GTTTTTTTGA GACGGAGTCT CTCTCTGTCT CCCAGGCTGG 1200
AGTGCAGTGG TGCAATCTCG GCTCACTGCA AGCTCCGCCT TCCAGGTTCA CGCCATTCTC 1260
CTGCCTCAGC CTCCCAGGTA GCTGGGACTA CAGGCGCCCG CCACCACGCC CAGCTAATTT 1320
TTTTTTTTTT TTTTTTTGTA TTTTTAGTAG AGACGGGGTT TCACCGTGTT AGCCAGGATG 1380
GTCTCAATCT CCTGAGCTCA TGATCCGCCT GCCTTGGCCT CCCAAAGTGC TGGGATTACA 1440
GGCGTGAGCC ACCACTCCCG GCCTCCTCCA GCCCCATCTC TTCACATGCT TTTCCCACCT 1500
CAGTTATGCT GGTCTCCTTT CTGTTCCTCA AATATGCCCA AGTCTTCCAG CCCCAGGGCC 1560
CCCGTGCTAT TTCCTGCCTC TCCACCTTCT GCAAAGCTAA GGCCCATCTT CCAGGTCTCA 1620
CATAAATACT GTCTTTCCCG AAAGCCTCTT CCAACCATCC ACAAGCAGGA TCCCAAACTC 1680
CTCCCATTCA ACCTGACAGC CTCACATAGC TCCTGTCACC ATGTGTAATT TTTGCTTACT 1740
AGCAGATCAA AGAACAGAAG CAAGCCGTTT GATTGTTTCT TTTTGTTTTG TTTTGTTTTT 1800
AGACAGAGTC TCACGAGCCT CCTTACAAAA TAGAAAAGTC AATGGGATTT CAGGGAAAAT 1860
GGATAATCTT CGTTGGGGGC AGTCAAGGAA GGCTTTGTGG AACCTTTGAA TTAGATCTTG 1920
ACATTATATC TTGACAGTAC TTTGAATAAA TACAAATAAT GTTATTTTTT TGTTAAGACT 1980
CATGCAACCG CATCTATGTA AATGAATCCG TACATAGTAT TCATTCGAGT GTGAAATCAG 2040
ACTTTGGGAT GCTTTAAAAT TTAACAGTCA GGAACACTTA CTCTATTTTA TGGACTTAAA 2100
TTTGTTGAGG TGGCAGGGAA CAACTTGAGT GAAGGGTGGG ACATGGCAGT GTGTATGTGG 2160
GGGAAAAAGG TGGCCAGCAG ATAAGGGAAG CAGGGGACAG AGTATTTTGA GGGATTAGAC 2220
CTGACCAGCT ATAACAGGAA ATAGAGGCTG TAGATTGAAG GATAGCTACA ATGGATGTTA 2280
TGGAGAAATT CCAACTGGGG TGGAAACATG TAGCTGCAAA ATTGGAAGAG CAGCTTATTC 2340
TAGGCAGAAA AGAAGAAAGT AAAAGGCATC TGAGGGGACA CTAAATTAAT GCTTACTGAT 2400
AAGTAAACAA GCCTCTGGAA GTAGAAAGGT AAAAGCATAA ATTGCTTGGT CAACCACAAC 2460
CGCTTGGGAG TGCTGCAGGC TTCATGACTA AACCAAAGTC TGTCCCTGAA GCTCCCTCTT 2520
CCGGCAGAAA TAAATACTGC ACACTAAGCT GGCTGACTCC TTTAATTAAA AGGTGCTTGC 2580
CAATCTCTAA ACAGTATACC TGTATGGGAG TCATAATTGT AATATCTTGG TGAGGATTTT 2640
GTTGTGCTTT CAGGCAAACC ATAAAAGGAA CACTAATTTA AATAAATACA AACAATGTTA 2700
TTTTATTCTT AAGATTCAGG CAACCACATC TATGTAAGTG AATCCTTACA TGGTATTCAT 2760
TCAAGTGTGA AACCAAACTT TGGGATGCTT TAAAATTTAA CAATCAGGAA CAAGACTCTG 2820
TTAAAAAAAA AAAAAAAGAA ATGTTAGAAC TCTGTCAAAC TATAAAAATA TAAAGTGAAA 2880
TAGCACAGTG CAGACAGACT GTACAGACCA GTGTGCTACC TTTCATGTAA AGGGGAATTA 2940
CATATATTAT ATATATGATT TTTTTATTAT TTGTGTATAT ACAGTACTCA CTGTATATGC 3000
ATAAAGTCTG CAAGTACATG CTGGGGGGAA GGGGTGGATG GGAGACAAGG ATGGAAGATT 3060
TTTTTGTTGT TTTTTTTTGG AGACCGAGTC TCGCTCTGTC ACTCAGGCTG GAGGGCAGTG 3120
GCACCATCTC AGCTCACTGC 3140