| Tag | Content |
|---|
EnhancerAtlas ID | HS069-00167 |
Organism | Homo sapiens |
Tissue/cell | GM18951 |
Coordinate | chr1:27728390-27730730 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:27729002-27729021 | CAGCCAGGAGGGGGCAGTG | + | 6.5 | | Nr2f6(var.2) | MA0728.1 | chr1:27728733-27728748 | TGAACTCTTGACTTC | - | 6.13 | | Stat4 | MA0518.1 | chr1:27728964-27728978 | CTTCCAGGAAATGG | + | 8.12 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_00672 | chr1:27727708-27734346 | Adipose_Nuclei | | SE_03542 | chr1:27728950-27729574 | Brain_Angular_Gyrus | | SE_04233 | chr1:27728639-27734039 | Brain_Anterior_Caudate | | SE_05445 | chr1:27728653-27735004 | Brain_Cingulate_Gyrus | | SE_06328 | chr1:27728211-27734690 | Brain_Hippocampus_Middle | | SE_08322 | chr1:27728718-27734855 | Brain_Inferior_Temporal_Lobe | | SE_09416 | chr1:27728715-27730486 | CD14 | | SE_11098 | chr1:27727304-27735914 | CD20 | | SE_13960 | chr1:27728880-27732456 | CD34_Primary_RO01536 | | SE_26307 | chr1:27728799-27730480 | Duodenum_Smooth_Muscle | | SE_27105 | chr1:27727756-27735417 | Esophagus | | SE_29771 | chr1:27728488-27734740 | Fetal_Muscle | | SE_37168 | chr1:27728493-27735920 | HSMMtube | | SE_41349 | chr1:27727446-27734485 | Left_Ventricle | | SE_48981 | chr1:27727610-27734081 | Right_Atrium | | SE_55577 | chr1:27728807-27730723 | Thymus | | SE_61796 | chr1:27727767-27766345 | Toledo |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027401 | chr1 | 27728096 | 27734299 |
|
Enhancer Sequence | TCTTAGGTAA AGGCAGGGAA GGCAGCTAGG CAGGACCCCT TGCCCCAAAT ATTAACCACT 60
CTCCCTGTCA TCAAGGGACT GGCAATTCTC CCATAAAAGA TTCCTTTGGA TGTGAAAGGC 120
TTATTTATTT ATTTACTTAT TTGAGATGAA GTCCCGCTCT GTTGCCCAGG CTGGAGTGTA 180
GTGGCACAAT CTCAGCTCAC TGCAGCCTCC ACCTCCCGGG TTCAAGCGAT TCTTGTACCC 240
CAGCCTCCCA AGTAGCTGAG ACCACGGGCG CACGCCACCA AGTCTGGCTA ATTTTTGTAT 300
TTTTAGTAGT GACGGGGTTT CACCATGTTG GCCAGGATGG TCTTGAACTC TTGACTTCAA 360
GTGATCCACC TACCTTGGCC TCCCAAAGTG CTGGGATTAC AGGTGTAGGC CACCGTGCCT 420
GGCCCATGAA AGGCTTTTTG TCCTTAAGCT TCAAGAGCAC CCTTTAAGCG CCCACACCTC 480
CTGGGGCTGA GGGGCAGTTC AGTGGGAGCA CCTGAAACTG CTCCCAGCCC CATGATCTAG 540
GAGGGAACTG GTTGACAACT AGCCCCGAGC AGAACTTCCA GGAAATGGTG CCAGGTTGCC 600
CTGGCCACTG GGCAGCCAGG AGGGGGCAGT GAGGAACTGG TGGAGGCAGC AAGTAGGGAG 660
GGCGGCTCCC GAGGAATGTG TGAGGGCTGC CTGCGATTAT GGGTTCCTGA AATCATGTGC 720
TGGTTTGTGT CCTTGTGCAA ACAACAGGGA TCTGTGCACG ATATGTGCAC CGGTCCTCAT 780
GTGCCCACTC ACGTGTCTCT GTGAAGCCCC AGCCCATACC TATAGGGAAC CCACTTTCTT 840
CTTAGGTAGC CAAGGGTGCA GGCACTTCCT GCTCTAAAGG TCTGGGATAG CCAGGCCCTC 900
AGCCAAGCTC ACTTGATTTC AAAGCGAGAG CAAAAATGAC CATCACCGTT CACTGCCCTT 960
ATAAAACTGG GCACCAGGGA GTGGGGCAGG TAAGAATGGA AACCTTTAAC AGGCTCCCTA 1020
CAACGTTAAA GCCCTCAATG ATTTTGGATG GAGACTCAAG CCGTTTCAGT TGCATGGTAA 1080
ACAGAGCATT GGGCTCTGGC TAGAGAGAGG CCTGTGTTTG AACCACGTTC TGTTCCTGGC 1140
CAGCTATGTG ATCTTAGGCA ACTGTGAATC TGTTTCTCTT CTGTGTAAAA TGGGGGACCC 1200
TTGCCTCTTA AGAATGAAAT AAAAGATATG CAGTCTTTGG CAGGTAGTGG GCGCTCAATA 1260
AATGCTTATT CTTCTCAGGA TCAGCCCAAG GAGGTGAAGC GACTTGCACA GGGTCACAGC 1320
TTCCGAGTGG CAGGGCCAGA ATTCAAGCTC AGGCCTCTTG CTTCCCAAAG CCACATTCCT 1380
TCCCTCCAAT TCCCTAGCAA GGGCGGCTCC CGAACCACCA TTTTGTCTTC TGCCAGGGCG 1440
GGTGTCTGGC TGCCTGTCAG TCACCGGCCT AGGGAAGCCA AGTGCTGACT AAACACAGGC 1500
CTGAGCAGGC GGGTGGAGCA AAGGGGCTCT GCAAGGGCGA ACTGGCTCCG CGGCCCCCTT 1560
CTCTGCACCA CCACCTCCAG CGATGAGCTC AGAGCGGCTG GCGCAGCAGT TGCTGACAAT 1620
TCAAAACTTC TGCCGCCTCT CCTGGGATGC CAGTGGGTGA CTCTCTCTCC GAACAGCAGG 1680
CGTGACCCGC AGTCACCAAC TCTGCTCCCG CCCCTCTCCC GGGGGCCACT ACACTGTGTC 1740
TGCTGGGCCC GGAACTGGGT GTCTGCTCAT AAATTACCCC CAGGGACAGT TACCCGCAGC 1800
AGCTGTGCTC GGAACAACCG TTGCTTCCTG GGTAGGTCAT TTTTTGGGTC AGAATACAAA 1860
CCCAGCCGCC TCGCCTTCCT CAGGCAGGAG AAGGGGCGTG CAGCAGCCTA AACCTTTTAT 1920
CGGATTCCAT TGTAAATCGT TCTATTTAAG GTAAGTTGCT TGGGTCTGAG AGGCAGACAA 1980
GATGCCGGCC AGATGTTGGG CGCAGCATCA GCATTCAGCC TGTACTCCTC TCCTGCCTGA 2040
TGCAAACAGT TGCCAGCAGA TTGTCTCCTG AGGCCCCAGC ACACCCCCTT TCTCATGGTG 2100
AGAAGGGGAC TGGGTATCTG GGTCTGCAGG TCCTCCAACC TGGGTCTCCT CCTAAACTGA 2160
AATGGTTTCC AGCCTTCTCC ACCTCTGCAC ACAATGCACT TTCCACACCC AAAAGCCTCC 2220
TGCCCTTTAG GCCCACCCAC ACTGGAGCCC CTCCTGAGCT CTGGCCACCA CCTGTGGCTG 2280
TTAGTGTCAT TTCCTTCTAA TCTCTTGTCC CATTAAAACA ATACCACAAA CACCAGAGGT 2340
|
