Tag | Content |
---|
EnhancerAtlas ID | HS065-02148 |
Organism | Homo sapiens |
Tissue/cell | GM18508 |
Coordinate | chr17:27293660-27295440 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:27293776-27293797 | AAAGAAAAAGAAAAAGAAAAA | - | 6.17 | Nr2f6(var.2) | MA0728.1 | chr17:27294621-27294636 | GAGGTTAAGAGGTTA | + | 6 | RFX1 | MA0509.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | + | 7.54 | RFX1 | MA0509.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | - | 7.56 | RFX2 | MA0600.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | - | 7.23 | RFX2 | MA0600.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | + | 7.32 | RFX5 | MA0510.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | - | 6.82 | RFX5 | MA0510.2 | chr17:27294874-27294890 | TGTTGCCATGACAACC | + | 7.15 | TFAP2A | MA0003.3 | chr17:27295027-27295038 | TGCCTGAGGCT | - | 6.32 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I028967 | chr17 | 27294136 | 27296281 |
|
Enhancer Sequence | GGGGCAGCCC CACTGATGGT ATCAGGTAAA TGGGAGGAGA GGTCCATGCA AGGCCTCTGT 60 TCCTGGGTGC CTTTGTGTGA ATAGAAAAAT GGGCCCTCTT TCTTCCCCCC CATTAAAAAG 120 AAAAAGAAAA AGAAAAAGAG GCTGTCTCAG GGCAGACCAG GGTCCAGAAA TTTGAGTTTT 180 ATGACTTTCA CCTGTCCTGT TACTATGTCT GTGAAAGTGG GAGGAGAATT CCTCCTCTTC 240 TGTCTCTCAT GGGGCTCTGG AGAGAATGGT CGGTAAGTGG CTAGTTGTGC TTGGCAGGCA 300 GTACAGGGCA GTGCTTAGCA GGTGGGCTGT GGGTCAGACT GCCTGGGTTT GAATGCAGGC 360 TTCTTCCCTA CGTGCTGTGC CACCGTGGGC AAGTTACCTA AATTCTCTGT GCCTCAGTTG 420 CCTCATTTAT CCACCCACTT TCAGTATTAC ATCCAAGGTT GTGGAGGTTA AGTGAGAAGA 480 CATATGTGCA GTTCCTGAAC AAATGCCTAA GACATCAGCC TGCTGTTATT GTTTGTAATC 540 TTGATTAATA ATAGCACCTC ACATCTACAT GTACTTTCCA GATTCTAAAA TGCCTTCACA 600 CTCTTCTTTC TTGATGTCTA CAATATGCTT GGGAGAAAGG CAGGCAAGGT AGGGGCTATG 660 AGCCCATTTT CAGATGAGAA CAGGTTCAGA GAGACCCTGT GCCCTCATCA CACAGCAAGG 720 AAGTACTAGA CCAGGAACTT GAAGCTCCTG GGCTCTGAAG CCTTCTTGCT TTCCACCACC 780 ACCCCACCTG CTTCCTCATT TGAAGTAGAA ACTTGGGTTC AGGGGTCAGA GAAATCTGAG 840 AGTAACAGAC AAGCCTGCTC TGGGTGGTTG TCCAGGGCAG CCACTCACAG TGACCTGGGG 900 AGAGGTCCCA GTCCAGGATG GGATGGAGAA AGGGGTGTGG GGCACCACAC CCAGAGTGGA 960 GGAGGTTAAG AGGTTAACTG ACGCCTAGTG GGGTCTAGAC CATGAGCCAG GCTCAGGCCC 1020 AGCATTTCCC CTTACATCTT CCCCTTTGAG TTCTTATCAC CACTCTAGTA AGGGAGGGCC 1080 CTCGTTTCAC AGATGAGGAA ACTGGGCTGG AATGGGGTGG AACTGGGCTG GAACTGTAGG 1140 AGGCTGGGGG CAGACAATGA AGCCCCCAGA CTCCATAGTA GTTAAAGTAT CACTTCCCAG 1200 GATGAGCTTC CTCCTGTTGC CATGACAACC GTTCCCGGGG AGCCTGAACC ACTGCAATCT 1260 GTTGAGTTAT TTTCTCACTG GAGTCTGTTT CTGGAGCCAA GTCCAGTGCC AGGAATGCTG 1320 AGGATGCAGG AGGGGGATGT CTGTCAGGGC CGTCTGCCTC CCCACCCTGC CTGAGGCTGT 1380 GGGAGGGGAG TTGACTTGGT CTTGCGATAA GGCCCTTGTG AGGGCTCATC CTTGTGACCT 1440 CCAACATCAG CTTGGACAGC TCGAGCACAG GTGTGGGTAC TAGGCCCCTC ACCCCCTCTT 1500 CTGGCACCCT CTTTCTCTAG CCCACGGAGA TTTGCGTGTG AGCACACGCT CCTCCTGTTC 1560 CCATCTCTGG GATCAGGGCT AATTACAGCC TATAATTAGG GGAATTACAC TCATTAAGGC 1620 AAGAGCTGAT CATTGACAAA AACTGGGCTG ACGAGGGAGG GCTTCTGGGA GCTGAGAAGG 1680 AGGCAGGACC AGGCCAGCTC TTCCAGCCCT TCCTTGGAGG TTGCTCCCCC TTGCTGGGCC 1740 TCCAGCTCAC TGCCATTCAG CCACCTTTGT CTGGCCCGAC 1780
|