EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS063-01296 
Organism
Homo sapiens 
Tissue/cell
GM18505 
Coordinate
chr12:6448230-6450940 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs4149576chr126449115hg19
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Sox3MA0514.1chr12:6449097-6449107CCTTTGTTTT+6.02
ZNF263MA0528.1chr12:6449769-6449790AGAGGAGGGGAAGGAGGATTA+6.01
ZNF263MA0528.1chr12:6448342-6448363TCTCCATTCCTCTCCTCTTCC-6.07
ZNF263MA0528.1chr12:6449681-6449702GAGGCAGGAGGAGGCAGAAGA+6.11
ZNF263MA0528.1chr12:6449762-6449783GGAGCAGAGAGGAGGGGAAGG+6.68
ZNF263MA0528.1chr12:6448772-6448793TCCTTCCCCAGTTCCTCCTCC-7.07
ZNF263MA0528.1chr12:6448775-6448796TTCCCCAGTTCCTCCTCCTCC-7.4
ZNF263MA0528.1chr12:6449687-6449708GGAGGAGGCAGAAGAAGAAGA+7.8
Number of super-enhancer constituents: 53             
IDCoordinateTissue/cell
SE_00073chr12:6429876-6453062Adipose_Nuclei
SE_00937chr12:6441910-6452217Adrenal_Gland
SE_01846chr12:6443695-6453374Aorta
SE_02480chr12:6448311-6451850Astrocytes
SE_03029chr12:6449024-6451281Bladder
SE_06566chr12:6441858-6453632Brain_Hippocampus_Middle
SE_10035chr12:6438969-6453212CD14
SE_13040chr12:6447883-6452162CD34_Primary_RO01480
SE_13529chr12:6441511-6452966CD34_Primary_RO01536
SE_14200chr12:6443260-6452231CD34_Primary_RO01549
SE_15315chr12:6442345-6452472CD4_Memory_Primary_7pool
SE_18836chr12:6441210-6452745CD4p_CD25-_Il17-_PMAstim_Th
SE_19574chr12:6443831-6452336CD4p_CD25-_Il17p_PMAstim_Th17
SE_23341chr12:6443729-6452159Colon_Crypt_1
SE_25906chr12:6441282-6453613Duodenum_Smooth_Muscle
SE_26809chr12:6441174-6453451Esophagus
SE_27628chr12:6443105-6455935Fetal_Intestine
SE_28923chr12:6442873-6453900Fetal_Intestine_Large
SE_29972chr12:6448080-6452293Fetal_Muscle
SE_31364chr12:6443928-6452274Fetal_Thymus
SE_31620chr12:6441150-6453360Gastric
SE_34182chr12:6441076-6452190HCC1954
SE_34423chr12:6443566-6453521HCT-116
SE_34717chr12:6439920-6456416HeLa
SE_36871chr12:6448676-6452223HMEC
SE_37589chr12:6441628-6453579HSMMtube
SE_38559chr12:6443527-6452261HUVEC
SE_39017chr12:6448018-6452186IMR90
SE_39732chr12:6447921-6448977Jurkat
SE_39732chr12:6449139-6452323Jurkat
SE_41073chr12:6441893-6453367Left_Ventricle
SE_41758chr12:6448313-6452153LNCaP
SE_42385chr12:6441703-6453465Lung
SE_44305chr12:6441623-6452279NHDF-Ad
SE_44860chr12:6441742-6452165NHLF
SE_46246chr12:6441184-6452424Osteoblasts
SE_46816chr12:6448915-6452147Ovary
SE_48385chr12:6442296-6453343Psoas_Muscle
SE_48759chr12:6441937-6453272Right_Atrium
SE_50121chr12:6441165-6453713Sigmoid_Colon
SE_51350chr12:6441271-6453622Skeletal_Muscle
SE_52248chr12:6448367-6451802Skeletal_Muscle_Myoblast
SE_52435chr12:6441420-6453707Small_Intestine
SE_53590chr12:6441148-6453533Spleen
SE_54702chr12:6441590-6453722Stomach_Smooth_Muscle
SE_55282chr12:6448174-6452113Thymus
SE_56478chr12:6448244-6453294u87
SE_57656chr12:6449846-6451588VACO_503
SE_64014chr12:6448352-6451802HSMM
SE_64883chr12:6447963-6452007NHEK
SE_65364chr12:6441945-6453548Pancreatic_islets
SE_66504chr12:6447921-6448977Jurkat
SE_66504chr12:6449139-6452323Jurkat
Enhancer Sequence
TCCCTCTAAT TCTCCCATTC ACATTTCTTA GTGTTTCTCA ACATGGTTTT TCCACTCCCG 60
AACCAAGGTG TCTGGCTTCC TGCCACCCTG CCCATCAACA CAAAATCCCA TCTCTCCATT 120
CCTCTCCTCT TCCTCACATC AGTATCCAAC TCTGCTTCCC TCCTTTATAG CTACCCTGAC 180
AGGCAGTGAC TTCAGATGTC AGCTCCACAT CCACTTTTCT ATGAGGCTTT CCCTCCGCCA 240
TCCCATCTGA CACATCTCTT GTTCCTTAAT TCCTTCAGCA AATAGTTAAG GGGCACAGTT 300
AATGTGACAG GTCCCGTATG GGTGCTAGGG ATGCTGAGGT GGATAATACA CAGCTCGTGC 360
TCTCAAGAGC TCTCACTTGA GTCAAAGACA GTCAGTTGTA GGCACTGAGA TCTATACAGG 420
GAGTGCTGCA GTTGCACAGT GAAGGACACT GAAGCAGCGT GGGGAAGCTC CTGAATTTTC 480
TGGAGCTGAG CGCAGGAGCT GAGACCTGCT AAGCAAGGAA AGGCAGTGGA CTAAGGCTCA 540
CCTCCTTCCC CAGTTCCTCC TCCTCCCAAC TGGTGCTCCA GGACACCACA TCACAATGCA 600
TTTGTGGATA TTTTCCTCGG GATTGCTCTG AAATCATTTT TCACTGTAAG CCATCTTGGT 660
TACTAGGCTG TAAGCTCTTT GAGAGCAGCA AAATCCTGTT TGCTTTGCCA CAGTCTCTCC 720
TGTATCATTC TTCCCTACTC CCCTACCCCA CTTCTCTCTC TCTCTCTCTC TCTCTCTCAC 780
ACACACACAC ACACACACAC ACACACACAC ACTGTGAGCT CTGCATTGCC CACTGAATGG 840
TGAGAAATTC AGAAGGATGT TGCATTCCCT TTGTTTTCCC TTTCCTCCAG CTCCAGGCCA 900
GGCTTCTGTC CCTTAGGAGA CATAATCCCA CCTGGGCTGA AGCACCCCAG GACGCAGGCA 960
CTTCCCTTTA CCTGTTCAGG CTACCTTTAC CCTCTGTTTT CCCAACACAG GTAGCCACCC 1020
AGTAATTACT ACTAGTCACA GCAATATAAA AACTTTATTG AGTGCTTTCT ATTTGCTACA 1080
ACCTATTCCC CTGATGGACT GTCAAAGCTG TGGGCAGGGA TTTTGTTCTC TGCTGTAATC 1140
CCAGCACCTA TCACAGTGTC TAGCCCAGAG CGCACACTTA ATAAATCAAA TGAACACTTA 1200
ACATGTATCA GTCTATTCAA TCTTCAAAAC AACAGTATGA GGTCAAGACT GTGACACCCA 1260
TTTTGGAGAT AAAGAAACGA AGGCATGGAA GGTTAGGTTA TATAAGCTGC TCTTGTTCAT 1320
GCAGGAGGTA TGTGAGGGAG CCAGGGGCCG CCCCCAAACA GAAAACAGAA GCAGGATGTC 1380
AGGGCAGCTG GCTGGTGGGG AGACCGTGGG GGAAGGACAG TGGGAAGAAG GGAAGAGCGG 1440
GTGGGACTAA GGAGGCAGGA GGAGGCAGAA GAAGAAGAGT GAGACCCTGA CCAGAGACGT 1500
GCTGCCTGGG GACCTGGGGC CGGGACCAGA GCGGAGCAGA GAGGAGGGGA AGGAGGATTA 1560
GCGAGAAAAG ATTTCAAAAA AAGAGGCTCT GAGAAGTCTG AGGAGAGTCT GGGGAGATTG 1620
CTGGAAGAAA GGAATGGTAG GAGAGGAAGA GTATAAGGCA CTAAAGAGAG GGGAGGTAGG 1680
CGCAGCCTTC AGAGGCCGGG CAGGGCAGGG AAAATCTGCC TGACTAGATG GGCCCAGGAC 1740
ATCTGAACAG GATGATTCCC GGACCAAGAC GTGGAGGACG ATCAAGGATA CATTGAAACA 1800
AGGCTGAGGC CAGAGAAAGG GACATTTTCC AGTGACGAAA ACAACTTTCT ACCAACTTCC 1860
CCAAACTGAA CTGTAGAATA AGAAACCAAG GGATTGTTGT TTAGGTCTGT GAGAAGCAGC 1920
GGGGAGGGGA AGCTGGAGGA CAGGCCCAGG GACACTGACC AGGTGGGGGT AGGACTAGCT 1980
CCCTGGGAAG GCTCAGTCCC ACAGCGGCTA CCTGCCTAGC AGCAGGCAAA AGGGTAAAGA 2040
ATGTCCCCAG GTGAGAGGCC GGGGCTTGGC CAGGGCACTG GGGACACTGT CCACTGGGTT 2100
GCCCTGCCCC ATCCAGTGTC CCAGCCCATT CTCAAATACC TCCCACCATG AGCATCCCAA 2160
ACCCACCACA CCAGCCCATC CCCACTCCTC AACTCACTCC CCCACTTCAC CAGCCGCCAA 2220
AATCCTGCCC TACAGGGTGT GCTCCACCAA GTTCCACAGG CAGCCTCGCC TCCCCACGGC 2280
CCAACACCCT CCAGGCCAGC CAGCTGACCG GAGGGACAGA ATTCAGAACC GTCTGGACTC 2340
CCCGAGCACT AATCTTCCTA CTCCCACTCC CTTCTTTTCC CCGCCAAATC TGCCCCACCC 2400
TGGGCCTATC TCCTGCCCAC ATTCCCTTGG CCGCCCACAA ACTTCCACCG CTGTCAGGGG 2460
CCAGGGCTTC CTTTTACTCT CTCCCTTTCA AACTTCTCCC ATTCCCCTGC CTCAGCGCAG 2520
CCCCTACTCC AAAAGGCGGA TGAATGGGGA ACCCCACACT GGCAGTGGCT GAGGTTAGGA 2580
CCTGCAGGCC TGAGGCTGGC GCCAGGACCA GGCCCGGGCA GGAGAGGCTC GGCCCCCTCC 2640
CGGAGAGGGC CCACGCCAGC CGGAAGGTGC CTCGCCCACC AGCCCACTCT TCCCTTTGTC 2700
CCTGGTCTCA 2710