| Tag | Content |
|---|
EnhancerAtlas ID | HS062-14047 |
Organism | Homo sapiens |
Tissue/cell | GM18486 |
Coordinate | chr6:39832850-39833590 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr6:39833258-39833277 | CAACCACTAGGGGGCGGTG | + | 7.71 | | ONECUT2 | MA0756.1 | chr6:39833115-39833129 | TTTATTGATTTATT | - | 6.29 | | ONECUT3 | MA0757.1 | chr6:39833115-39833129 | TTTATTGATTTATT | - | 6.71 | | Sox3 | MA0514.1 | chr6:39833567-39833577 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_04795 | chr6:39830607-39833684 | Brain_Cingulate_Gyrus | | SE_05787 | chr6:39830557-39833661 | Brain_Hippocampus_Middle | | SE_06718 | chr6:39832298-39833642 | Brain_Hippocampus_Middle_150 | | SE_07750 | chr6:39832010-39833505 | Brain_Inferior_Temporal_Lobe | | SE_39683 | chr6:39832635-39833151 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I039862 | chr6 | 39830558 | 39833684 |
|
Enhancer Sequence | GTAATTCAGT TTCCCCCTCT TGCTTCCTGC TGAGTCCCTT CACAGTTGGT CTCCTTGCCT 60
TCCCGAAGCC CTGTGCAGTG CTCTGCTCCC ATGCCGGTCC TCCTGGCCAA CTCTGCCTCA 120
CCTGACTTCA CTTCCCAGCC CCTACTCCTC TCCTGGGAGG CTGCCAGGGC TTGGGAGGAG 180
GGGAGAGAAA CCTGGGAAAG TGGGATAAAC CTCAGGTCCT GAGGAGCTCT CTAAAGAGGA 240
ATCGAGGGCA AGTGCTTTTT AAAAATTTAT TGATTTATTT TTGGTAAGGG GATAGAATAG 300
GAGCGTGACC AAATGGACAA GGTACAAAAG AAAGAGCCTT GTGAGGATGA GGGGGCAGGG 360
TGAGTGCCCC ATCCAGGAAA AGAGGGACGC ACGGGTAGAG AAGTACTCCA ACCACTAGGG 420
GGCGGTGTGG TGTCTCTGGA TGGGATTTGC CATCTAGAAT GGGAGCAACG CAGGCATGGA 480
AAATGGGGTA GAAGTCCTGG AGCCATAGGA GGACACCTTT CCCTTCCCAG GCCACAACGT 540
GTGGGGCCCA AAGTGGGGCT CCTTGTGTCT GGGTCTGCCC CGTGGTGTGC TGGAACTGGC 600
TAGTAACAGC TGGCGAATGC TGAGTGTCAA ATTTTCAGCA ATTTTGTAAG CTGGTTGTTA 660
AACGTAGCTA TGATTAAAAT TTCAATTGTA TAAATTTAAG ATTCAGTAAG TTATATCAAA 720
ACAAAGGTAA TAAATACTTG 740
|
